| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_609 |
|---|
| Symbol | fhs |
|---|
| ID | 8657545 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. VS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013552 |
|---|
| Strand | - |
|---|
| Start bp | 574937 |
|---|
| End bp | 576730 |
|---|
| Gene Length | 1794 bp |
|---|
| Protein Length | 597 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | formate--tetrahydrofolate ligase |
|---|
| Protein accession | YP_003330086 |
|---|
| Protein GI | 270308028 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0932168 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGACTATAA ATAACCGCAA ATCCCACTTA AAAGACCTTG ACCCCGGCCT GATGAAAGAC
TGGGAAATAG CCGAAAAGGC CGAAGAATTC CTGAAGCCGT CAAAAATTCT GGCTGAGGAA
CTGGACCTGA CCGAAGATGA GATAATCCCC CACGGCAAAT ATGTTGCCAA AGTAGATTTT
GCCGGGGTAC TTACCCGCCT GAAAGACAGA CCAAACGGCA AGTATATAGA TGTAACCGCC
ATTACCCCCA CCCCGCTGGG TGAAGGTAAA AGCACTACCA CTATGGGGCT GGTGCAGGGG
CTGGGAAATC TGGGCAAGAA AGTAACCGGG GCAATCCGCC AGCCTTCCAG CGGCCCTACC
TTCAATATAA AAGGCTCGGC AGCCGGGGGA GGACGCTCCC AATGCCTGCC GCTTTCACCC
TTTACTCTGG GGCTGACCGG GGATATAGAT GCTGTGACTA ACTCACACAA TCTGGCCATG
GTCGCCCTTC AGGCCAGGCT TCAGCACGAA GCGAATAATA CAGATGAATT TCTGTCCAGC
CGCAATTTAA AACGGCTGGA TATAGACCCC GCCAGAGTGG AACTGAAATG GGCAATAGAC
TTTTGCGCCC AGTCCCTCAG GGAAATCATT ATGGGCATAG GCGGTAAAAC AGACGGCTAC
CAGATGCACT CCGGCTTCGG CATATCCGTA AGCTCCGAGG TGATGGCCAT ATTTTCGGTT
TTTACCGGCT TGGCAGACCT GCGGGAACGT ATGAGCAAGA TAATTGTAGC TTACCGCCAA
AACGGCGAAC CGGTTACCAC CGCAGACCTT GAGGTAGACG GCGCCATGAC CGCCCTGCTC
CTTCGGGCGG TAAACCCGAA TTTGCTTCAA ACTATAGAAG GCCAGCCGGT GTTTGTCCAT
GCCGGGCCTT TTGCCAATAT TGCTATCGGG CAGTCATCTA TTGTGGCTGA CCGGCTGGCA
CTTAAACTGG CTGATTACCA TGTGACCGAA AGCGGTTTCG GGGCGGATAT CGGTTTTGAA
AAGTTCTGGA ATATAAAGTG CCGCTTAAGC GGCTTAAAAC CGGATTGTGC AGTTATTGTG
GCTACGGTCA GGGCTTTAAA GATGCACGGC GGCGGGCCCA AAGTAACTCC CGGTGCCCCC
CTTGACCCTG CCTATACCAC TCCCAATGCG GCGCTGGTGG AAAAGGGCTG CCAGAATATG
CTTGCCCACA TCCAGACTGT AAAAACGGCA GGCATAAACC CGGTGGTCTG CATAAACCAC
TTTTCAACAG ATACGCATCA GGAAATAAAT ATTATCCGCC GCACAGCCGA GCAGGCAGGT
GCCAGAGTAG CTGTTTCTTA TCACTGGGCA AACGGCGGTG AAGGAGCAGC CGAACTGGCT
GAAGCAGTGA TAGATGCCTG TAACGAACCT AATGACTTTC ATTTCCTTTA CCCCGAAGAT
ATGCCGCTTA GGGAAAGGAT TTATACCATT GCCCGTAAGG TTTACGGGGC AGACGGCGTT
TCCTACACCC AGACAGCCAT GGAAAAGCTT ACCCGTCTGG AAAACACGGG CAACACCCAG
TTTATGCCCA GCTGCATGGT CAAAACCCAC CTCAGCCTCT CGCATGACCC CACACTTAAA
GGACGCCCCA GCGGCTTTAC CCTGCCTATA CGTGATATAC TCACCTATAT GGGGGCAGGC
CTGGTAGTGC CGGTGGCGGG GGATATCAAA CTTATGCCCG GCACTTCGTC TGACCCCAAT
TTCAGGCGGA TAGATATAGA TACTCACACC GGCAAGGTTA AGGGTCTGTT CTAA
|
|---|
| Protein sequence | MTINNRKSHL KDLDPGLMKD WEIAEKAEEF LKPSKILAEE LDLTEDEIIP HGKYVAKVDF
AGVLTRLKDR PNGKYIDVTA ITPTPLGEGK STTTMGLVQG LGNLGKKVTG AIRQPSSGPT
FNIKGSAAGG GRSQCLPLSP FTLGLTGDID AVTNSHNLAM VALQARLQHE ANNTDEFLSS
RNLKRLDIDP ARVELKWAID FCAQSLREII MGIGGKTDGY QMHSGFGISV SSEVMAIFSV
FTGLADLRER MSKIIVAYRQ NGEPVTTADL EVDGAMTALL LRAVNPNLLQ TIEGQPVFVH
AGPFANIAIG QSSIVADRLA LKLADYHVTE SGFGADIGFE KFWNIKCRLS GLKPDCAVIV
ATVRALKMHG GGPKVTPGAP LDPAYTTPNA ALVEKGCQNM LAHIQTVKTA GINPVVCINH
FSTDTHQEIN IIRRTAEQAG ARVAVSYHWA NGGEGAAELA EAVIDACNEP NDFHFLYPED
MPLRERIYTI ARKVYGADGV SYTQTAMEKL TRLENTGNTQ FMPSCMVKTH LSLSHDPTLK
GRPSGFTLPI RDILTYMGAG LVVPVAGDIK LMPGTSSDPN FRRIDIDTHT GKVKGLF
|
|---|
| |