Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_600 |
Symbol | |
ID | 8657536 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | - |
Start bp | 564133 |
End bp | 565278 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | sensor histidine kinase |
Protein accession | YP_003330077 |
Protein GI | 270308019 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0751439 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAG TATTTAGTTT CTTCTACAGC CAAATCCGCC GCCTGCCCAG ATTATTTGCC AATGTGCATA TCTGGATACT GATACTGCTG TTTACCGGCG GTTTTTTCCT GCATTACCCC CAGCTACTGC CCTTTATCGG CCAGATAGAA CCTGATTCTT TTCTGTACCT GACCCGCCAT TCGGTAGGAC GGCTTATAAT GCTGCTGCCG GTTACCTACA CCGCTCTGGT ATTTGGCTTA AGACCGGGAC TTCTCTCCCT GGTACTGGCT ATTGCTATTA TTATTCCGAA TATTTTCGTG ACTGATACGG TCACCCCTGA TGATATTATT GAAATTATCG GCATTATTAT CATCGGGCTG GTAGTAAACC TCTGGCTGGA AAGCTATGAG ACTGATAAAA AACACCGCCA GCAGGCTTAC CTAAAAATGG AAACCGCCCA GCGCGAACTT CAGCGTATGC AGCAAAACCT GCGTTTTTAT CTTAAACAAA TCACTATAGC CCAGGAAGAC GAACGCCGCC GTATTGCCCA GGAGCTGCAC GATGATACCG CTCAGGACCT GATTGTCATA TCACGAGCCA TAGACCGCTT TGTTACCCAA AACCCCAATC TGGGCGAAGA CAATCTGGCT GAACTGGAAG AGCTGCAGAA CCACGTAAAC CGCACCTTAA GTGAAGTCCG CCGTTTTGCC CAGGATTTAC GGCCTTCGGT ACTGGATGAT TTGGGGTTGA TTCCGGCTTT GGAATGGCTG ATACCTGACC TTTCAAAGCA CTTCGGCATA AATATTGATA TAGATGTAAA CGGGGAAATC CGCCGTTTTG CCCCCGAAAC CGAACTGGTG TTATTCCGTA TAGTCCAGGA GTCATTGCGT AACGTAGGCA AGCACGCTCA GGCAACCAAA GCCTGGGTTT ATATAGACTT CGGCAAATAC AAAGCCACCC TGACCATAAA AGATAACGGC AGGGGGTTTT TGCTGCCGGA ACGGGTGGGA GATTTGGCCG CTCTGGGCAA ACTGGGACTG ACCGGTATGC AGGAACGGGC ACAGCTTATT GGCGGGCGGC TCTCCATCCA GTCCAAACCG GAGGTAGGTA CCATGGTAAC AGTAGCCGTA CCAAATTCCG GCAACCTGGA GGATAATGAG GTTTAA
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Protein sequence | MKKVFSFFYS QIRRLPRLFA NVHIWILILL FTGGFFLHYP QLLPFIGQIE PDSFLYLTRH SVGRLIMLLP VTYTALVFGL RPGLLSLVLA IAIIIPNIFV TDTVTPDDII EIIGIIIIGL VVNLWLESYE TDKKHRQQAY LKMETAQREL QRMQQNLRFY LKQITIAQED ERRRIAQELH DDTAQDLIVI SRAIDRFVTQ NPNLGEDNLA ELEELQNHVN RTLSEVRRFA QDLRPSVLDD LGLIPALEWL IPDLSKHFGI NIDIDVNGEI RRFAPETELV LFRIVQESLR NVGKHAQATK AWVYIDFGKY KATLTIKDNG RGFLLPERVG DLAALGKLGL TGMQERAQLI GGRLSIQSKP EVGTMVTVAV PNSGNLEDNE V
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