Gene DhcVS_598 details

Gene Information

• Locus tag: DhcVS_598
• Symbol: cobU
• ID: 8657534
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. VS
• Kingdom: Bacteria
• Replicon accession: NC_013552
• Strand: +
• Start bp: 563073
• End bp: 563639
• Gene Length: 567 bp
• Protein Length: 188 aa
• Translation table: 11
• GC content: 47%
• Product: cobinamide kinase/cobinamide phosphate guanylyltransferase
• Protein accession: YP_003330075
• Protein GI: 270308017

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.0000000527851
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATTATT TACTTATCGG CGGTGCCCGC AGCGGCAAAA GCAGTTATGC TGAGGAACTG 
GCCAAATCCA TAGGCGGCAA TATTGTGTTT GTGGCAACAG CCGAAGCCGG TGATGATGAA 
ATGAAAACCC GTATTTTGCG GCATCAGCAG GCCCGTCCGC CCGAATGGAG GCTTATAGAG 
GCCAGTTTGG GGGTGGGTGA GAAAATAAGT GCTTACAGGG AAAATGCCGA CGTGATTATA 
CTTGACTGCA TTACCCTGCT GGTAAATAAC ATAATGTGCC AGTATATGCT TGAACATGGT 
GATGAGCTTA CCGGTGATGC GGCAGACTAT CTTGATACTG CGGTTAAAAA AGAAATAAAT 
GATATAATAC TGGCTATGGA AAAGACGGGT GCGTCATTTA TTGTGGTGAC CAATGATGTG 
GGTGCGGGGC TTATCCCGCC CAATGCCATG GCCAGAGTCT ATCGTGATTT GCTGGGAAGG 
GCAAACCAGA TGCTGGGTGC ATATGTTGAA TATATTTACC TGATGGTGGC CGGACTGCCT 
ATGCAGGTTA AACCGTTACT TCGTTAG 

 

Protein sequence

MNYLLIGGAR SGKSSYAEEL AKSIGGNIVF VATAEAGDDE MKTRILRHQQ ARPPEWRLIE 
ASLGVGEKIS AYRENADVII LDCITLLVNN IMCQYMLEHG DELTGDAADY LDTAVKKEIN 
DIILAMEKTG ASFIVVTNDV GAGLIPPNAM ARVYRDLLGR ANQMLGAYVE YIYLMVAGLP 
MQVKPLLR