Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_597 |
Symbol | gpmB |
ID | 8657533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | + |
Start bp | 562418 |
End bp | 563020 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | phosphoglycerate mutase family |
Protein accession | YP_003330074 |
Protein GI | 270308016 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00000681703 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTGA TACTGGTACG TCACGGGGAG ACCGAAACAG ATAACTGCCG CCGTTACTGG GGGCACAGTG ATATCGGCCT TTCAGACTCC GGTCACGCTC AGGCTAACTC CCTGCGGGAA TATTTGTCTG CGGTTAGGAT AGATGCCATT TATTCCAGTC CTCTTAAGCG CTGCACGGAA ACTGCTGAAA CCATTGCCTA CGGGCGGCCT CTTTCAGTCA ATAAAAATAA TGACCTGAAG GAAATAGATT TCGGGCGGGT AGAGGGCCTT ACCTACGATG ATGTTTTAGA ACGCTACCCG GATATTGCCC AGAAATGGGC TGAGGGCAGC TTTGACGTGC ATTTCCCGGA CGGAGAAGGC ATGGAACATT TTGCCCAGCG GGTTGTTAAA TTTGTAAAAA TGCTCTCCAA GCACCGGGAG GATGAGACTT TATTACTGGT GGGGCACGGG GGTGTTTTCC GTATCCTTAT CTGCCATTTT CTGGGCATTG ATTACAAACA TTGGTGGCAG TTTACGCTGG GTGTTGGCTC GGTAACTGTT CTGGATATTT ACTCTGAGGG GTCTATACTG GAAAAACTGA ACGACAAGTC CCACCTGGGC TGA
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Protein sequence | MKLILVRHGE TETDNCRRYW GHSDIGLSDS GHAQANSLRE YLSAVRIDAI YSSPLKRCTE TAETIAYGRP LSVNKNNDLK EIDFGRVEGL TYDDVLERYP DIAQKWAEGS FDVHFPDGEG MEHFAQRVVK FVKMLSKHRE DETLLLVGHG GVFRILICHF LGIDYKHWWQ FTLGVGSVTV LDIYSEGSIL EKLNDKSHLG
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