| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_59 |
|---|
| Symbol | ispD |
|---|
| ID | 8657013 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. VS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013552 |
|---|
| Strand | + |
|---|
| Start bp | 54802 |
|---|
| End bp | 55485 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
|---|
| Protein accession | YP_003329561 |
|---|
| Protein GI | 270307503 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGATTAGGG TATATCAATT TTTAGCACTT CAGGATATGC TCAGTTTCTC CTCCTCTGGC
GCCTGCCCAA ATAAAAAAGG GGCTGGCACA TCTCAAAATA TCTTCAAGAT GAGCCGGCCC
CTTTACCATC AGGTATCCGG TTTGGTGTTA ACACGTCTTC TGGCTTCCGG ATTATCCCCC
GGTTCCGCCC TTCCCATCAG GGTACTGCCC TGA
|
|---|
| Protein sequence | MFLNEKVGAV IVAAGQSRRM EGQDKIFALL AGKPVLAHTL SVFQKSPEID DIALVMAEHN
IEKAKELIKE YNFSKVIAVC PGGELRQDSV CSGLTALCDC GWIIIHDGAR PLLDTASIPE
GLEAAKLCGS AIAAVPLKDT IKEISPEGLV EKTLPREKLI SVQTPQVFRA DIIQKAYRRV
GITATDDAQL VEKLKLPVKI FSGAYANIKI TTPEDLLMAE ILLKKGR
|
|---|
| |