| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_589 |
|---|
| Symbol | fepD |
|---|
| ID | 8657525 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. VS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013552 |
|---|
| Strand | + |
|---|
| Start bp | 555457 |
|---|
| End bp | 556548 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | ABC-type cobalamin/Fe3+ siderophore transport system, permease component |
|---|
| Protein accession | YP_003330066 |
|---|
| Protein GI | 270308008 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0262833 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGTTA ATACAAATCT GAACAAGGAA AACTGCCCGG CAGTTCCCGG CGGTATGCAC
CCCCACTGGA GGGGACGAAT TATTGCTATG GCCGGATTAT TTGGACTGCT GCTTTTGGCG
GCTATTTTTG CTATATCGTT CGGTTCGGTT GAAGTGCCGT TTTTTACCAC TATATCTATC
ATGATTTCAA AAATTCCCTT CGTAAATATT ATCCCGGACT GGACTGTAAA CACACAAACC
ATTATTTGGG ATATCCGTTT ACCTAGGGTT CTGCTGGCCG GGGTGGTGGG TATGGCTTTG
GCTGTAGCCG GGGCTACTTA TCAGGGGCTT TTCCGAAACC CTCTGGCAGA CCCGTATCTT
ATTGGTGTGG CACAAGGTGC CGCCGTAGGC GCGGTACTGG GGCTGATACT TGGTATTGGT
TTTGATGTTC TGGGTATTTT TACTACGCCG TTGTTTGCCT TTGCCGGGGC TTTCGGGGCG
GTGGGTGTTG TATATATGCT TGCCAGAGTG GGAAACCGCC TGACTGTGAC TACCCTGATA
CTGGCTGGTG TGGCGCTGGG GTCGTTCCTT ACGGCTATTG TATCGTATCT TATTACGGTT
AGCGGTGACA AGATTCACTC TGTTATGTTT TGGCTGATGG GTAGTTTTTC CATGGCCGGC
TGGGAGAGTG TGAAGATAGT AATACCTATC GTAATCATAG GCACTCTGGT TATACTCCTG
TTTGCCCGTT CGCTGAATCT TATCCAGCTG GGTGAGGAGC AGGCTCAGGA ACTGGGAGTG
GATGTAGAAC GGATGAAGAT TATCCTCCTT ACGGCGGCTA CCCTGATAAC AGCCGCGGCA
GTATCTTTCG TGGGTATTAT CGGTTTTGTG GGTATTATTG TTCCCCATGC CGTGAGACTG
ATCTGGGGGG CAGACTACCG TTTTTTGCTG CCGCTTTCGG CTCTGGTGGG GGCGGTCTTT
ATGATAATGG CTGATATCGC TTCTCGTACT CTGGTTGCTC CCAATGAAAT TCCGGTAGGG
GCTATTACGG CTCTGGTAGG TGCGCCCTTT TTCCTGTATT TGCTTAGAAA ACGCACCCGA
ATGCTCTTTT AG
|
|---|
| Protein sequence | MGVNTNLNKE NCPAVPGGMH PHWRGRIIAM AGLFGLLLLA AIFAISFGSV EVPFFTTISI
MISKIPFVNI IPDWTVNTQT IIWDIRLPRV LLAGVVGMAL AVAGATYQGL FRNPLADPYL
IGVAQGAAVG AVLGLILGIG FDVLGIFTTP LFAFAGAFGA VGVVYMLARV GNRLTVTTLI
LAGVALGSFL TAIVSYLITV SGDKIHSVMF WLMGSFSMAG WESVKIVIPI VIIGTLVILL
FARSLNLIQL GEEQAQELGV DVERMKIILL TAATLITAAA VSFVGIIGFV GIIVPHAVRL
IWGADYRFLL PLSALVGAVF MIMADIASRT LVAPNEIPVG AITALVGAPF FLYLLRKRTR
MLF
|
|---|
| |