Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_588 |
Symbol | fepB |
ID | 8657524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | + |
Start bp | 554387 |
End bp | 555403 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | |
Product | ABC-type cobalamin/Fe3+ siderophore transport system, periplasmic component |
Protein accession | YP_003330065 |
Protein GI | 270308007 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000000378985 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGGACA ATATAAATAA AAAACTTAGC AGTAAAAGTG CTCGTCTGGG TACTACTGTT GCCGGTATTT TTCTGAGTTT GGTTTTATTG TTGGGTTTGG TGGGTGGCTG TAAAGCTGCT GATGATACCA ATAATGATGA CGAAAACCCT GTTGTAACCG AGGTAACTTA TCCCTTAACT GTTACTGACC AGCTGGGCAG AACTGTGGAG ATTAAATCTG AACCACAGAC CATAGTATCC CTTTCCCCCA GCAATACCGA AACGATTTAT GCCATGGGTC TTGAAGATAA ACTGGTGGGT GTAACTACTT ACTGTAACTA CCCAGAAGCT GCAGCAGCTA AACCTAAAGT AGGCGGTTTT TCAAATGTAG ATGCTGAAGC GGTGACTGCC ATAGGACCTG ATATTATTTT GGCATCCAAT ATCCATGCAT CAACAGTTAT CCCGCAGCTT GAACAGCTGG GGCTTACCGT AATAGCTATT TCTCCGGATA ATCTGGAAGA GGTGCTGGAA TCTATTGAGC TTATCGGCAA ATGCCTTAAT CAGGTTGAGA AAGCCAATTC ACTGGTAGAT GAGATGCAAA CCCGTATTGA TGCGGTAACA TCCAAGATTA AAAACCTGTC TGAAAGTCAG AAACCGCGTG TTTTATATAT CGTTTGGCAT GAACCTCTTA TGAGCGTTGG TTCTACTGCC TTCATAACCG GTTTGATTAC TGCTGCCGGA GGCGTTAGTA TTACTGCTGA TTCTGCAGAA TCTTATCCCA CCATTAGCTT GGAAACAGTG CTTGGGGCTA ACCCCCAGGT GGTAGTGGTT GGTACAGGCA TGGGCTCAGG AGCTGATGCG CCGCTGCTTT TTATGCAGGA TGAACCCCGT TTGGCTGATA TTGACGCCAG AATAAACGGC AATATATATA GTATCAATAC AGACCTTATC GGCCGTACCG GCCCGCGGAT AGTAGAGGCT CTGGAACAAC TGGCTAAGAT GCTTCACCCT GAAATATTTG GAGAATTTAG CGCGTAA
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Protein sequence | MLDNINKKLS SKSARLGTTV AGIFLSLVLL LGLVGGCKAA DDTNNDDENP VVTEVTYPLT VTDQLGRTVE IKSEPQTIVS LSPSNTETIY AMGLEDKLVG VTTYCNYPEA AAAKPKVGGF SNVDAEAVTA IGPDIILASN IHASTVIPQL EQLGLTVIAI SPDNLEEVLE SIELIGKCLN QVEKANSLVD EMQTRIDAVT SKIKNLSESQ KPRVLYIVWH EPLMSVGSTA FITGLITAAG GVSITADSAE SYPTISLETV LGANPQVVVV GTGMGSGADA PLLFMQDEPR LADIDARING NIYSINTDLI GRTGPRIVEA LEQLAKMLHP EIFGEFSA
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