| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_586 |
|---|
| Symbol | |
|---|
| ID | 8657522 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. VS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013552 |
|---|
| Strand | + |
|---|
| Start bp | 552138 |
|---|
| End bp | 553019 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | |
|---|
| Product | methyltransferase |
|---|
| Protein accession | YP_003330063 |
|---|
| Protein GI | 270308005 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.00349861 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCCGGTT TTCCATTTTT TAAAATAAAG GGGAAGTTTG TGTTTAAAAA ACTGGCAGAT
ATAAATAATA AGCCTGAGTT ATATCATCAG TACAGTGCAT CTGTACTCTG GAATGACCCT
CATATTTCCT CCCGTATGCT GGAGTTCCAT CTCAACCCGG ATATTGAGCC TGCATCACGC
AAAGCTGTCT TCATTGAAAA ATCCGCCTGC TGGATAGCAG AATATTTTAG GTTGGGTGAT
GGCAAGCTGG TTTGTGATTT CGGCTGTGGG CCGGGACTTT ATACCAGTCG TTTGGCGGCT
GCGGGTGCGG ATGTGACCGG TATAGATTTT TCAAGCCGTT CTATAGGTTA CGCCCGTGAA
TTTGCATCCG CTCATCAGCT GGATATCCAT TATATAGAAC AAAACTACCT GGAGTTTGCT
GCTCCGAAGA AGTTTGACCT GATAACACTT ATCTATTGTG ATTACTGCGC TCTAAGCCCT
GCCCAGCGTT GCCGGCTTCT TTCGGTCTGG CGGAAATGCC TGAAAGATAG CGGGCAGATA
TTGCTGGATG TATTTTCTCT TTCAGCTTAC GAAGGGCGGG CAGAAAGTGC CGCATATGGG
CACTGTTTGA TGGATGGTTT CTGGTCCGGC AGTGATTATT TCGGCTTTGT AAATACCTTT
AAATATCCGC TTGAAAAAGT GGTTCTAGAT AAATACTCTA TTATAGAGGC GGATAAGGAG
TGGCAGGTTT TCAACTGGCT GAAGTATTTC TCTGCCCCGG AGCTTGAGGC TGAGTTAGCC
GCAAACGGGT TTGAAGTAAC AGGTGTATTT TCAGATGTTG CAGGGGCGGC TTTTTGCGAA
ACTTCACCTG AAATTGCCGT AGTTGCCCGC AAGAAAAACT AA
|
|---|
| Protein sequence | MPGFPFFKIK GKFVFKKLAD INNKPELYHQ YSASVLWNDP HISSRMLEFH LNPDIEPASR
KAVFIEKSAC WIAEYFRLGD GKLVCDFGCG PGLYTSRLAA AGADVTGIDF SSRSIGYARE
FASAHQLDIH YIEQNYLEFA APKKFDLITL IYCDYCALSP AQRCRLLSVW RKCLKDSGQI
LLDVFSLSAY EGRAESAAYG HCLMDGFWSG SDYFGFVNTF KYPLEKVVLD KYSIIEADKE
WQVFNWLKYF SAPELEAELA ANGFEVTGVF SDVAGAAFCE TSPEIAVVAR KKN
|
|---|
| |