Gene DhcVS_584 details

Gene Information

• Locus tag: DhcVS_584
• Symbol: tktA
• ID: 8657520
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. VS
• Kingdom: Bacteria
• Replicon accession: NC_013552
• Strand: -
• Start bp: 549490
• End bp: 551490
• Gene Length: 2001 bp
• Protein Length: 666 aa
• Translation table: 11
• GC content: 52%
• Product: transketolase
• Protein accession: YP_003330061
• Protein GI: 270308003

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAAATA CGAAGTTAGA TAGTTTATGT ATAAATGCCC TTCGCTTTCT TTCGGTAGAT 
GCTGTTCAGA AGGCAAATTC GGGGCATCCC GGAGCACCTA TGGGTATGGC CGCTATGGCA 
TATGCCCTGT GGCAAAAATT TCTTAAGCAT AACCCGCAGG ATCCCGTCTG GCCTAACCGT 
GACCGTTTTA TACTCTCAGC TGGCCATGCC TCAGCTTTGC TTTACTCACT TCTCCACCTT 
ACCGGTTATG ACTTGCCGCT GGATGAGCTG AAAAATTTCC GCCAGTGGGG CAGTAAAACC 
CCGGGGCACC CGGAATACGG CCTGACCCCC GGCGTTGAGA TGACTACCGG CCCGCTTGGG 
CAGGGTTTTG CCAGCGGTGT GGGTATGGCT ATGGCCGAAG CCCATCTGGC CGCCGTTTTT 
AACCAGCCGG ATTGCAAAAT AATAGACCAT TATACTTACG GTATAGTCTC TGACGGAGAC 
CTGATGGAGG GTGTGGCCTC CGAAGCAGCC TCTCTGGCCG GGCATCTGGC ACTGGGTAAG 
CTGATTTACC TGTATGACGA TAATGAAATA TCTATTGAAG GTTCAACAGA GCTGGCTTTT 
ACCGAAAATA CAGCTCTGCG TTTTGAAAGT TACGGCTGGC AGGTAATTGG CCCGGTAGAC 
GGACTTGATC CTGAGGCAGT TTCAGTGGCT ATTAAAGAAG CCCAGTCAGA TTCCGCCCGC 
CCCAGTCTGA TTATCTGTAA AACAGTTATC GGTTTTGGCA GCCCGAACAA GGCTGGCAAG 
GCCTCTGCTC ATGGCGAACC GCTGGGAACA GACGAAGTGG CCAAAAGCCG CAAATCTTTA 
GGGTGGGATT ACGAGCCTTT TGTAATACCG CCTGAAGCTC TGGCGGAATT CCGCATGGCA 
CTGGATAAAG GCAAAACTGC CCAACAGGTC TGGCAATCCA AGCTGGACTA CTATTCAAGC 
CGTTATCCCG AAAAAGCCGC CCTTTTACAG GACAGGCTTT CTGGTAAGCT ACCCGAAGAC 
TGGGATAAAG ACCTGGATAA ACTTTTTGAC AAGGCTATGG CCAGCCGCGA GGCTTCCGGT 
TTGATTATAA ATACACTGGC TTCCCGCCTG CCAGCCCTTA TGGGCGGTTC GGCAGACCTC 
AGCCCGTCTA ACAAAACTGT TATCAAAGAC GGCGGCGAAT ATGAACCGCC GCATTATGAG 
GGGCGGAATA TCCATTTCGG AGTGCGGGAA CACGCCATGG GGGCAATAGC CAACGGGCTG 
GCTCTCCACG GCGGGATTAC ACCTTATGTT GCCACTTTCC TTATATTTTA TGATTACATG 
CGTCCGGCGG TACGGCTGGC ATCACTTATG GGGCAAAGGA TTATTTATAT CTTCACCCAT 
GACTCTATCG GTCTGGGAGA GGACGGCCCT ACCCACCAAC CTATTGAACA GCTGGCCGGT 
TTACGTTCGG TGCCCGGTCT GGTTACTATC CGCCCGGCAG ATTCGTATGA AACAGCTCAG 
GCATGGAAAA TGGCTATACT CCGCAAGAAT GGCCCGACCG CTATTGCCCT GTCTCGCCAG 
AAACTGCCGC TTTTAGATAA CTCGCAGGCA AATTCCGTAA ACTTGTCTAA AGGGGCATAT 
ATACTGGCAG AGACCGATTC CCGCCCGCAG GTTGCCCTGG TAGCCAGCGG CTCAGAAGTA 
AGCATAGCCG TTCAGGCAGC TGAAATACTT AAAAACAAAG GTATCTCGTC AAGAGTAGTA 
TCCTTCCCTT CGTGGCAGCT TTTTGAGGCT CAACCCCAGA CCTACCGCCA GAGCATATTG 
CCAGCTTCCC TGCCACGGGT AATAATAGAA GCCGGCAGCG CGCAGGGATG GTGCAAATAT 
TTGGGCGCAA ACGGCGCTCT TATTTCCATT GACCATTTCG GAGCATCAGC CCCGGTGCCT 
GTGCTTTACC AACACTTTGG GCTAACCCCG GAAAATATGG CTGAAAAGGC TTTAAAGCTT 
TTGGAGAATG AAGATGAGTA A 

 

Protein sequence

MSNTKLDSLC INALRFLSVD AVQKANSGHP GAPMGMAAMA YALWQKFLKH NPQDPVWPNR 
DRFILSAGHA SALLYSLLHL TGYDLPLDEL KNFRQWGSKT PGHPEYGLTP GVEMTTGPLG 
QGFASGVGMA MAEAHLAAVF NQPDCKIIDH YTYGIVSDGD LMEGVASEAA SLAGHLALGK 
LIYLYDDNEI SIEGSTELAF TENTALRFES YGWQVIGPVD GLDPEAVSVA IKEAQSDSAR 
PSLIICKTVI GFGSPNKAGK ASAHGEPLGT DEVAKSRKSL GWDYEPFVIP PEALAEFRMA 
LDKGKTAQQV WQSKLDYYSS RYPEKAALLQ DRLSGKLPED WDKDLDKLFD KAMASREASG 
LIINTLASRL PALMGGSADL SPSNKTVIKD GGEYEPPHYE GRNIHFGVRE HAMGAIANGL 
ALHGGITPYV ATFLIFYDYM RPAVRLASLM GQRIIYIFTH DSIGLGEDGP THQPIEQLAG 
LRSVPGLVTI RPADSYETAQ AWKMAILRKN GPTAIALSRQ KLPLLDNSQA NSVNLSKGAY 
ILAETDSRPQ VALVASGSEV SIAVQAAEIL KNKGISSRVV SFPSWQLFEA QPQTYRQSIL 
PASLPRVIIE AGSAQGWCKY LGANGALISI DHFGASAPVP VLYQHFGLTP ENMAEKALKL 
LENEDE