Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_580 |
Symbol | |
ID | 8657516 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | + |
Start bp | 546834 |
End bp | 547697 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | |
Product | universal stress protein family |
Protein accession | YP_003330057 |
Protein GI | 270307999 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTATTTTA AACGCATACT GGTAACCCTG GATGGTACAA AAATAGCCGA AAAGACTCTT CCGGTAGCTG AACTTATGGC AAAAGATACT GAAACCGAAC TGTTACTGGT AAGCATATGT GATCCCAAAC CTAAAATTAC TGATGAACGA CAGAAGTATT TAGATGCTAA ATCTGCCGAA TTAAGGGAAA AAGGCATAAA AGCTAGCGGA AAAATGTTTT GCGGTGAGTT GCTGCCGCTT ATTTTAAAAT GTATAACTGA TAATAGTATT GACCTGTTGT GTATGGCTTC TCATGGATAT ACCGGAATTA AGAAAATGGT ACTGGGTAGT GTATCCGAAA AGCTTATTAA ATCTACCAAA CTGCCGGTAT TATTGATAAA AGAAGGTTAT GAACCGGACA AGGCACTTTT TGAAAATATC TTACTGCCGT TGGACGGTTC ACTCTTTTCA GAGACTTGCC TGAAACAGGT ATCTATTCTG GCACACGATT TTAAAAGTAA ACTTACATTG CTGGTTGTTA TTCAACCGCC ATGTATACCC TCAGACCGTT CACCCAATAT TCAGCCCAGC TGGGATGAAT ACTATCAGGC ACTGCTTGAA GAACTTAGAC AGCAGGCTCA GTCCTATTTG GAACGGCTGA CCGGCGAATT GCAGTCAAAT GGAATTAAAA CTGAATTCCG TATGGAAATT TCAGATAAGA TTCCTGAAAC TATTTTAAGT ACCGCCGAAG ATATAAATGC CTCGCTTATT TCATTTACCA CCCATAACCG CTCTGGAATA GAGAAATGGT ATTATGGAAG CGTGGCAGCC GGCTTGATTG AAAATTCCCC TCACCCCATG CTTTTATGGC GGAACTCCAT CTAA
|
Protein sequence | MYFKRILVTL DGTKIAEKTL PVAELMAKDT ETELLLVSIC DPKPKITDER QKYLDAKSAE LREKGIKASG KMFCGELLPL ILKCITDNSI DLLCMASHGY TGIKKMVLGS VSEKLIKSTK LPVLLIKEGY EPDKALFENI LLPLDGSLFS ETCLKQVSIL AHDFKSKLTL LVVIQPPCIP SDRSPNIQPS WDEYYQALLE ELRQQAQSYL ERLTGELQSN GIKTEFRMEI SDKIPETILS TAEDINASLI SFTTHNRSGI EKWYYGSVAA GLIENSPHPM LLWRNSI
|
| |