Gene DhcVS_535 details

Gene Information

• Locus tag: DhcVS_535
• Symbol: pth
• ID: 8657474
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. VS
• Kingdom: Bacteria
• Replicon accession: NC_013552
• Strand: -
• Start bp: 499343
• End bp: 499912
• Gene Length: 570 bp
• Protein Length: 189 aa
• Translation table: 11
• GC content: 51%
• Product: peptidyl-tRNA hydrolase
• Protein accession: YP_003330015
• Protein GI: 270307957

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACTTA TTATCGGTCT GGGAAACCCC GGCAAAGAAT ATTCAGGCAA CCGCCATAAC 
GTGGGTTTCC AGTGCCTTAG CCGTTTTGCC AAAGACAACC ATATCAGCTT GGACAAAAAA 
TGCTGCCTTT CCCGCACCGG TTCTGGCCGC ATAAATGACG AAGAAATAGT GCTGGCCAAA 
CCCCAGACCT ATATGAACCT CTCCGGCAAA GCCGCCAGCC AGCTGCTTCG CCGTTACAAC 
CTTAAAGCCG CTGATATTAT TGTAGTGCAG GATGATTTGG ATTTGCCTGC GGGCAAAATA 
CGCCTGCGGC TGGGGGGAAG TGCCGGCGGG CATAACGGCA TTTCATCTAT TATTACAGAT 
ATCGGCACCA AGGAATTTAT CCGCCTAAAG ATAGGTATCG GCAAGCCGGA TAGCCGGAAT 
AACGGAACTG AGGTGGTAGA CCATGTACTG GGCAACTTCG GCGGGGAAGA ACGGGAGATT 
ATGGAAAAGG CTATTACCCG TGCTTCCGAA GCACTCACCT GCCTGCTTAC CTGTGGGCTG 
GATACCGCCT CCAACCGTTT CAACTCTTAA 

 

Protein sequence

MKLIIGLGNP GKEYSGNRHN VGFQCLSRFA KDNHISLDKK CCLSRTGSGR INDEEIVLAK 
PQTYMNLSGK AASQLLRRYN LKAADIIVVQ DDLDLPAGKI RLRLGGSAGG HNGISSIITD 
IGTKEFIRLK IGIGKPDSRN NGTEVVDHVL GNFGGEEREI MEKAITRASE ALTCLLTCGL 
DTASNRFNS