| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_512 |
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| Symbol | |
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| ID | 8657452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. VS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013552 |
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| Strand | + |
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| Start bp | 479932 |
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| End bp | 481524 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | |
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| Product | ABC-type dipeptide/oligopeptide/nickel transport system, periplasmic component |
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| Protein accession | YP_003329994 |
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| Protein GI | 270307936 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.135113 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA TACTGTTTGC AATTTTTTCT GTTTGTCTCA GTTTCAGTTT ATTACTGAGC
GGCTGTGGTT ATGCACCCGG AGATACCGCT ATGCCTACAG GCGACAATGT ACTTACCCTG
ATTGGAGAAG AACCTTATAC CCTTGACCCT GCCAAGGTAA GTGATATTTC TTCGGTGACC
TATATTTACC AGATATTCAG CGGTTTGCTG AAAATGGGAG ATGACCTGAC TCCTGTTGCG
GATATTGCCG AAAGTTGGGA GGTAAGCCCT GACGGGCTTA CCTATACGTT TTATTTAAAA
CCTAATGTGA AATTTCATAA CGGACGTGTT GTCACTGCCG CAGATTTTAA ATATTCATGG
GAAAGGGCTG CCAGCCCGGA AACTGCCTCA GGCACGGTGC TGACCTTTTT GGGAGATATT
CAGGGTGTAA CTGAAATGGT ACAAGGACAG GCAACATCTA TTTCAGGGGT GACTGTGGTA
GATGATTTAA CGTTAAGGGT AAAGCTGGTA TCCCCCTGCA GTTTCTTCCT TTCGAAAATT
TCATATGTGA CTGCTTTTGT GGTAGACAAA AATAATGTGT CTCAAGGCAG TGGATGGTGG
AAAAAACCGG TGGGTACAGG TCCTTTTACG CTTACCGAAC TTACCCAGGG AAACTATATT
GTACTAAATA GAAACCCCGA TTATTATGAT ACACCGGCAA AAATTGCCAG TGTTATTTTC
CGTCTCCAGT CCGGCCAACC TATGGATTTA TATGAATTGG GCGGGGTAGA TGTGGCAGCT
GTCACTGCTG ATTATCTGGC TAAAGCCACA GATCCGGACG GCGTTTTTGC AGCTGATTTA
CAGGTAGTGC CTCAGCTCGG TTTTTACTAT TTTGCCTATG TAACCAGTAA AGCCCCGTTT
GATGACCCTA AAATCAGGCA GGCTTTTAGT ATGGCGGTAG ATAAAGCCCG TATTATAGAG
CTCTGTTATA AAGGTAGTGT CAGCGTGGCC GAGGGTATCT TGCCGCCGGG TATGCCCGGG
TACAATCCGG AACTGGTTGG ACTTGAGTAT AATCTGGAAC GTGCCCTTGA ACTGATAGCC
GAATCTTCCT ATGGCAGTGT GGAAAACCTG CCTACTATCA CTCTGACAAC GTCAGGCTGG
GCCGGGTTGC TTGCTCCGGA ATTGGAAGCA GTGATTGACC AGTGGAGGCA GAATCTGGGG
GTGGAAGTGA TAGTCCGCCA GATAGATATG GAGCTTTTCC TTTATGACCT CCAGACAGAA
AAAGATAACC TCTATTATTC CGGCTGGGTG GCAGATTACC CCCATCCGCA AGATTTTCTG
GCAGTGCTTT TTGAGACCGG TGCATCTTAT AACAGCGGAG ATTATTCTAA CCCTGAGGTA
GATGCCCTGC TGGCAAGGGC GGCTGCCACT CTGGATACTC ATGAAAGCAT GCAGCTTTAT
GCCCAAGCGG AGCAATTGCT TATAAATGAT GCTGCCTGTT TTAGTTTTTG GTTTGGGAAA
AACTATATGC TGGTCAAACC CTATGTAAAG GGCTACAAGC TTAATGCAAT GGGGATTCCG
ATACTTACAG AAGTTACCGT TGAAGATCAC TAA
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| Protein sequence | MKKILFAIFS VCLSFSLLLS GCGYAPGDTA MPTGDNVLTL IGEEPYTLDP AKVSDISSVT
YIYQIFSGLL KMGDDLTPVA DIAESWEVSP DGLTYTFYLK PNVKFHNGRV VTAADFKYSW
ERAASPETAS GTVLTFLGDI QGVTEMVQGQ ATSISGVTVV DDLTLRVKLV SPCSFFLSKI
SYVTAFVVDK NNVSQGSGWW KKPVGTGPFT LTELTQGNYI VLNRNPDYYD TPAKIASVIF
RLQSGQPMDL YELGGVDVAA VTADYLAKAT DPDGVFAADL QVVPQLGFYY FAYVTSKAPF
DDPKIRQAFS MAVDKARIIE LCYKGSVSVA EGILPPGMPG YNPELVGLEY NLERALELIA
ESSYGSVENL PTITLTTSGW AGLLAPELEA VIDQWRQNLG VEVIVRQIDM ELFLYDLQTE
KDNLYYSGWV ADYPHPQDFL AVLFETGASY NSGDYSNPEV DALLARAAAT LDTHESMQLY
AQAEQLLIND AACFSFWFGK NYMLVKPYVK GYKLNAMGIP ILTEVTVEDH
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