| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_504 |
|---|
| Symbol | atpC |
|---|
| ID | 8657444 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. VS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013552 |
|---|
| Strand | + |
|---|
| Start bp | 474442 |
|---|
| End bp | 474864 |
|---|
| Gene Length | 423 bp |
|---|
| Protein Length | 140 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | ATP synthase F1, epsilon subunit |
|---|
| Protein accession | YP_003329986 |
|---|
| Protein GI | 270307928 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.000115824 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGCTAAAT TAAAGCTGGA CATAGTTACT GCGGAACGTT CGGTGTTTTC CGAAGAGGTA
GATGTGGTGG TTGCCCCCGG TATTGAGGGT GAAATGGCCA TATTGCCTCA TCATGCCCCG
CTGATGACAG CTTTGCAGGC GGGGGAACTC AAGGCTAAAA TCGGCTCTGA GGAATATTCT
ATGGTGGTTT CCGGCGGTTT CCTTGAGGTA CGGCCTGACA GGGTAATCGT GTTGGCAGAT
AGTGCCGAAC GGGCAGAGGA AATTGATATT GCCCGGGCTG CCGAGGCCAA GAAGAGGGCT
GAAGCCCGCA TGGCTGACAA ATACGAACCT GGTATGCTGG CTGCCGAAAC AGAAGCTTCA
CTGCGACGGG CTATGATACG CCTGAAGGTA GCCGAAAAAC GGCGGAAACA CCCCCAAGTC
TAG
|
|---|
| Protein sequence | MAKLKLDIVT AERSVFSEEV DVVVAPGIEG EMAILPHHAP LMTALQAGEL KAKIGSEEYS
MVVSGGFLEV RPDRVIVLAD SAERAEEIDI ARAAEAKKRA EARMADKYEP GMLAAETEAS
LRRAMIRLKV AEKRRKHPQV
|
|---|
| |