| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_501 |
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| Symbol | atpA |
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| ID | 8657441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. VS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013552 |
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| Strand | + |
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| Start bp | 470614 |
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| End bp | 472125 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | |
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| Product | ATP synthase F1, alpha subunit |
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| Protein accession | YP_003329983 |
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| Protein GI | 270307925 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0562093 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGAGCGCAC GTGGTCAAGA CATAGTATCT ATTATTAAAG AGCAGATAAA AGAATTCGGT
GCTCCGGTCA GCATGACCAG CGTCGGTTCG GTTATCGAAG TAGGCGATGG CATCGCCCGT
ATTCATGGTC TTTCCAATGC CAAGTACAAC GAACTTTTGG AATTCCCCGG CGGTGTTATG
GGCATTGCCC TTAACCTTGA AGAAGACAGC GTTGCAGCTG TTATTCTGGG CGAAGATTCC
AATATTAAAG AAGGCGACGA AGTAAAGGCT ACCGGTCGTA TTTCTGAAAT TACGGTTGGT
AAAGGTATGA TTGGCCGCGT TGTAGACCCT TTAGGCCGCC CTCTGGACGG CAAAGGTCCT
ATCAAGGCTG AATCAACCCG CCCCCTTGAG CGTATCGCCC CCAACGTAGT TGACCGTAAA
TCAGTAAACA CTCCGGTTCA GACAGGTATC AAAGCCATTG ATGCCATGAT ACCCATCGGC
CGCGGTCAGC GTGAGCTGAT TATTGGTGAC CGTTCAACCG GTAAAACCGC CATTGCTCTG
GATACCATTA TTAACCAGAA GGGCGGGGAT CTGGTTTGTA TTTATGTGGC TATCGGCCAG
AAAGCTTCCA AAGTAGCCCG GACAGTAGCT TTGCTTGAGC AGTACGGTGC TATGGAGCAT
ACTATCGTGG TTGCGGCAAA CTCTTCTGAC GCAGTAGCTT TGCAGTATCT GGCACCTTAT
GCCGGCTGCG CTATCGGTGA AGAGTTTATG GAACAGGGTC AAGATGCCTT GGTGGTTTAT
GATGACCTTA CCAAGCACGC TTGGGCTTAC CGCCAGCTTT CCCTCCTTCT GCGTCGCCCG
CCCGGCCGTG AGGCTTATCC GGGTGATGTA TTCTACCTGC ACAGCCGTTT GCTGGAACGG
GCTGCCCGCC TTAATGATAA GCTCGGCGGC GGTTCGCTGA CTGCTTTGCC TATTATTGAA
ACTCAGGCCG GAGACGTTTC GGCTTATGTA CCTACCAACG TTATCTCCAT TACTGATGGT
CAGATTTATC TTGAACCGGA TATGTTTAAC GCCGGTATCC GACCCGCGGT CAACGTGGGT
ATATCGGTGT CACGCGTGGG TTCAAGCGCT CAGACCAAGG CCATGAAGAA GGTTGCCAGC
AAACTGAAGA TGGATATGGG TCAGTATCGT GAATTGGCTG CTTTTGCCCA GTTCGGTACT
TCCGAACTTG ATAAAGCTAC CCGTATGCAG CTGGAGCGCG GTCAAAGAAT CACCGAGGTA
CTCAAACAGG GTCAGTACCA GCCGTTGCCC ATGGCTAATC AGGTTGCTAT CCTGTATGCC
GTGCTGAACG GGTATCTTGA CAGTATAGAA GTTGAAAAAG TACGTGATTT TGAAAGCGGG
TTCTATCGCT TCCTCGAAGC GAACTATGCT TCGGTGCTGA ACAATATTAC CAAGGAAAAT
GCCATCTCTG CTGAAACCGA GACAGCCCTT AAGACCGCTT TGGATGATTA TAAGAAGGGT
TTAGTAGCAT AA
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| Protein sequence | MSARGQDIVS IIKEQIKEFG APVSMTSVGS VIEVGDGIAR IHGLSNAKYN ELLEFPGGVM
GIALNLEEDS VAAVILGEDS NIKEGDEVKA TGRISEITVG KGMIGRVVDP LGRPLDGKGP
IKAESTRPLE RIAPNVVDRK SVNTPVQTGI KAIDAMIPIG RGQRELIIGD RSTGKTAIAL
DTIINQKGGD LVCIYVAIGQ KASKVARTVA LLEQYGAMEH TIVVAANSSD AVALQYLAPY
AGCAIGEEFM EQGQDALVVY DDLTKHAWAY RQLSLLLRRP PGREAYPGDV FYLHSRLLER
AARLNDKLGG GSLTALPIIE TQAGDVSAYV PTNVISITDG QIYLEPDMFN AGIRPAVNVG
ISVSRVGSSA QTKAMKKVAS KLKMDMGQYR ELAAFAQFGT SELDKATRMQ LERGQRITEV
LKQGQYQPLP MANQVAILYA VLNGYLDSIE VEKVRDFESG FYRFLEANYA SVLNNITKEN
AISAETETAL KTALDDYKKG LVA
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