| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_5 |
|---|
| Symbol | spoT |
|---|
| ID | 8656964 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. VS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013552 |
|---|
| Strand | - |
|---|
| Start bp | 6015 |
|---|
| End bp | 8201 |
|---|
| Gene Length | 2187 bp |
|---|
| Protein Length | 728 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | relA/spoT protein, GTP pyrophosphokinase |
|---|
| Protein accession | YP_003329514 |
|---|
| Protein GI | 270307456 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCTTTTCA TGGATAATAA ACGTATTTTC ATTGCGGTTA TAGGTGCCTC CAAAGCCACT
CCTGAGGAAA CCCGTTTGGC AGAGGAAGTG GGCAAAGAAC TTGCGCTTAG ACAGGTTACA
CTTGTCTGCG GGGGCATGGG TGGGGTAATG GAAGCCGCCT GCCGGGGCGC ATCCTTAAAC
GGGGGGCTGA CCATAGGCAT ACTGCCGGGA AACAGCCGCG AAGAGGCTAA CCCGTATGTC
CAAATACCTA TAATAAGCAG TATAGGTTTT GCCAGAAATG TCATGGTGGT CAAATCTGCC
CAGGCAGTTA TTGCGGTGGG CGGTGCTTAC GGCACTCTGT CTGAAATAGC CTATGCCCTC
CAAAGCAGAC TGCCGGTAAT CACTTTAAAC AGCTGGTCAA TGAGCCAGAA CGGCAAGGCT
GACGGCGCTG TAATCAAAGC CGGAAATGCC ATTGAAGCGG TTACAATGGC TCTGGATTTA
ATAAACTAA
|
|---|
| Protein sequence | MEFADLKEKA SKYLPPEKLV FLEEAYNYAA AAHTGQMRKS GEPFIEHPLN VALTLADLQL
DVSTLSAALL HDVPEDANIS LEQIDKKFGP DVAKLVDGVT KLSKLALGPA IEDARRPGGN
ASLRQAENLR KMLVAMSEDL RVVFIKLADR FHNMRTLQAL SAEKRRSIAK ETMEIYAPLA
HRLGIWELKW QLEDLAFRYL DPRHYRQVAN LVDSKLAQRK NYIEHVSAIL QSEFEKNGLK
VELSGRPKHL YSIYQKMEKY ASQGKQFEDI YDVLALRVLV NDIPDCYHAI GIVHSLWHPI
PGAFDDYIAN PKPNGYQSLH TAVMSLGTTP LEVQVRTYQM HHIAEYGVAA HWRYKTAGKE
DVNFEDRIGW LRQLIEWHRD MRGAEEFLES VKTDIFNDQV FVFTPKGEIK DLAKGATPID
FAYRIHTELG NRCIGAKANG RLVPLDYQLK NGEVVEIVTT KKDRGPSRDW LNANMGYIKT
HHAREKILAW FKKQERTENL ERGRELLEKE LKHIGIKTVD REALAKAFKY ENADEFLAAI
GYGAVSVHQV SMKLLSQQEQ PRVVAPPLQT AKPSSQSSVS VMGTGSLLTN IAKCCNPVPG
DDIIGYVTRN RGVTVHRQDC HNILHEEERE RLVSVDWGMP KEELYPASMR IQAWDRVGLV
RDVSTVVAEE KISILSMTVT ENDDKTTTLS MTAQIKSLSQ LTRLMAKLEG IRGIISINRV
GTDGSRSG
|
|---|
| |