Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_499 |
Symbol | atpF |
ID | 8657439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | + |
Start bp | 469519 |
End bp | 470028 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | ATP synthase F0, B subunit |
Protein accession | YP_003329981 |
Protein GI | 270307923 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.000743335 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGAAAAAC TGGCAGAACT GGGAATAAAT ATACCTTCTT TCATAGCCCA GGTTGTAAAC TTCGGTTTAC TCTTAGGTCT GCTGTATCTG TTTGCCTATA AACCCATTCT GGCCAAACTT GACGAGCGTT CCGCCCGTAT CAAGGAAAGC ATGGAACGGA CAGACCAGGT AAAAGAGCAG GCCCAGCGGG CGGAAGAAGA GTTTAAAAAG AAGATTGGCG AAGCCAGCCA GCAGGGGCAA CTGGTGATTG AACGGGCTGT AAAGACCGGT GATGAAATCC GCCAGAAGGC CATAGAGGAA GCTAGGGCTG AAGCTGAAGC CATGCTTAGC CGCGCCCGGA CTGAAATACG TCAGGAACGT GATGAAGTAG TGGACCAGCT GCGCAAGGAA TTTGCCGAAC TGACCATTTT GGCGGCCGGT AAGGTTATTG ACCAATCTTT AGATAAAAAG GCGCATCAGG CGCTGATTGA CAGTGTGCTT GAAAGTAGCA CCAACCTGCG GAAAAATTAA
|
Protein sequence | MEKLAELGIN IPSFIAQVVN FGLLLGLLYL FAYKPILAKL DERSARIKES MERTDQVKEQ AQRAEEEFKK KIGEASQQGQ LVIERAVKTG DEIRQKAIEE ARAEAEAMLS RARTEIRQER DEVVDQLRKE FAELTILAAG KVIDQSLDKK AHQALIDSVL ESSTNLRKN
|
| |