| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_486 |
|---|
| Symbol | |
|---|
| ID | 8657426 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. VS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013552 |
|---|
| Strand | - |
|---|
| Start bp | 452532 |
|---|
| End bp | 453875 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | metal-dependent amidase/aminoacylase/carboxypeptidase |
|---|
| Protein accession | YP_003329968 |
|---|
| Protein GI | 270307910 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTAACA AGCCAAGACC AAACCCCTAT TGGCGGTGTA TCAGTTTAAA ATCAAAAACC
TGCATATCCA AGCGTAAACA AACAGTCTTT ATGCCGTTAC AGCAGAACGG CAAATGGTAT
TTAAGGCGGG TTTGGGATAT AATCAGGTCA ATGTCAGATA ACAATCTTGC CAATATCAAA
AGTGCTGTTA TAAAAATGAT TGACACTGAA AAGGGCAGTT TGGAAGAGCT GTCTCTTAAG
CTGCATGCCA ACCCTGAGTT GGGCTATCAG GAATATAAAG CTGTAGAATG GTTGTGCGAA
TACCTGTCCA GACACAATTT CAGTATTGAA AGAAATACCG GCGGCCTCAA GACTGCCTTC
AAAGCCACTT TCGGTCAGGG TAAACCGGTT ATAGGTTTTC TGGCTGAGTA CGACGCCCTG
CCCCAGCTGG GTCATGCCTG CGGCCATAAC CTTATTGCCA CCGCGGCAGC GGGTGCGGCT
GTAGCCGCCC GTCTGGCCGC CAAACTTTAC GGCGGTACGG TCTGTCTTAT CGGCACTCCG
GCTGAAGAGC TTAGCGGCGG TAAAATACAG ATGGTGGAAA AAGGTGTATT TAAAGAACTG
GAGGCGGCGC TTATAGCCCA CCCCGGCAAT GATGATATTG CTACCACCCA GGCACTGGCC
TGTGTAACAT TAAACGTAGA GTATTTCGGT AAAGAATCCC ATGCCGCCGC CCACCCGGAC
AAAGGCATAA ACGCACTTGA CGCCATAGTG CTGGCCTATA CCAGCCTCAA TTCCCTCCGC
CAGCACATAG AGCCGGGTGC CCGTATTCAC GGCATTATTA CCGACGGGGG CAAAGCCGCC
AACATTGTAC CCGGGCATTC CGCCGGCACT TTCCTGATAC GTTCCCAAAC TCTGCCCTAC
CTAAGAGAGC TGATGGACAG GGTACTGGAC TGTTTTAAAT CTGCCGCCCA GGCTACCGGT
GCCCGTTTGG AGTACCGCTT TGATAAATCC ATATATGCCC CCATGAATAA CAACATGGCT
CTGGCAAACC TATATGTAAC AAACATGGAT ATGCTGGGCC GCAAGACTTT ACTTGAAGAC
CCTGAGATGA ATTTTGGAAG TACCGACATG GGCAACGTCA GTCAAATTGT ACCCAGCCTG
CATGGGTATT ACTCCATTAC CCGTAAAGAA GTTTCCGGCC ATACCGAAGA ATTTGCTTCT
GCCGCCTGTT CGTCAAATGG TATTAAGGGT GCTTTAGATG CCGCCAAGGC TATGGCTATG
ACCGCAGCTG ACTTACTCGG GAACCCAGCC AATCTGGATA AAGTACGAAC AGAATTTCAA
AAATCTACCC GGCCATCCGC CTGA
|
|---|
| Protein sequence | MLNKPRPNPY WRCISLKSKT CISKRKQTVF MPLQQNGKWY LRRVWDIIRS MSDNNLANIK
SAVIKMIDTE KGSLEELSLK LHANPELGYQ EYKAVEWLCE YLSRHNFSIE RNTGGLKTAF
KATFGQGKPV IGFLAEYDAL PQLGHACGHN LIATAAAGAA VAARLAAKLY GGTVCLIGTP
AEELSGGKIQ MVEKGVFKEL EAALIAHPGN DDIATTQALA CVTLNVEYFG KESHAAAHPD
KGINALDAIV LAYTSLNSLR QHIEPGARIH GIITDGGKAA NIVPGHSAGT FLIRSQTLPY
LRELMDRVLD CFKSAAQATG ARLEYRFDKS IYAPMNNNMA LANLYVTNMD MLGRKTLLED
PEMNFGSTDM GNVSQIVPSL HGYYSITRKE VSGHTEEFAS AACSSNGIKG ALDAAKAMAM
TAADLLGNPA NLDKVRTEFQ KSTRPSA
|
|---|
| |