| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_444 |
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| Symbol | rpoA |
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| ID | 8657384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. VS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013552 |
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| Strand | + |
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| Start bp | 413523 |
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| End bp | 414515 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | |
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| Product | DNA-directed RNA polymerase alpha subunit/40 kD subunit |
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| Protein accession | YP_003329926 |
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| Protein GI | 270307868 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00000264016 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCTGATC TAGCTATACC CACAATTAGT TGCACCGAGA GCGATGGCAA GTACGGATGC
TTTGTGGTAG AACCTTTGGA AAAAGGTTTC GGGACTACTA TGGGTAATTC ACTGCGCCGT
ATACTTCTTA GCTATCTGGA CGGGGTTGCC ATTACCCGTG TCCGGATAGA TGGTATCCAG
CATGAGTTCA GTGCTCTGCC CAAGGCCAAA GAAGATACAC TTGATTTTTT GCTGAACCTT
AAAAATATAA GGGTTGAGAG CCTTTCCGGG CTTGAGGGTA TTTTGTACCT GAGAGCTTCC
GGTTCTAAAG TAGTTACGGC AGCTGATATT GAGCCCTCAA ATGATTTTGC GGTAGTAAAT
CCGGAGCTGT ACCTGCTTAC CCTTGATTCG GATGATGCAG TATTAAATGT GGAACTTGAG
GTGGAACTTG GCCGAGGCTA TCGTCCTCCT GAAAGTACCG AAAATACTCC CATAGGGACT
ATTCCGGTAG ATGCCATTTT TACTCCCATC CGCAAAGTGA ACTTTACCAC CGAGCCTATG
CATGTAGGCC GCGAAACCAG CCTTGAACGG TTGGTGCTTG AGGTCTGGAC TGACGGTACA
GTAGAACCTG CTACCGCGGT CAGCCGCTCA GCAGACATTC TGGTGAAACA GTTTGCGGCT
TTGGTTAGCC ACAGCAAGGT AGTGGCTGAA GTAGAGGCAA GCGAGCCGGT CAAATATGCT
ATACCCGAAG AAAAATATAA CATGCCTATT GAACAGCTGG ATTTGTCCGT CAGGGCTGTC
AATTGTTTGC GGCACGCAGG TATAACCACT GTGGGTGAGG TTATAAACAG GGGAACTAAA
GAGTTGCTTA CTCTTCGGAA CTTTGGTCTT AAGTCTTTGA CCGAGCTTGA GGATAGGCTC
AAGACTATAG GTCTGTCCTT GAACCCCGAA GATGAACTGT TTGAAGATGC TGAAAACACT
AAGAAGAAAA ACAAAGGCAT AGACGAAGCC TAA
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| Protein sequence | MSDLAIPTIS CTESDGKYGC FVVEPLEKGF GTTMGNSLRR ILLSYLDGVA ITRVRIDGIQ
HEFSALPKAK EDTLDFLLNL KNIRVESLSG LEGILYLRAS GSKVVTAADI EPSNDFAVVN
PELYLLTLDS DDAVLNVELE VELGRGYRPP ESTENTPIGT IPVDAIFTPI RKVNFTTEPM
HVGRETSLER LVLEVWTDGT VEPATAVSRS ADILVKQFAA LVSHSKVVAE VEASEPVKYA
IPEEKYNMPI EQLDLSVRAV NCLRHAGITT VGEVINRGTK ELLTLRNFGL KSLTELEDRL
KTIGLSLNPE DELFEDAENT KKKNKGIDEA
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