| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_433 |
|---|
| Symbol | rpsE |
|---|
| ID | 8657374 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. VS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013552 |
|---|
| Strand | + |
|---|
| Start bp | 407804 |
|---|
| End bp | 408322 |
|---|
| Gene Length | 519 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | ribosomal protein S5 |
|---|
| Protein accession | YP_003329916 |
|---|
| Protein GI | 270307858 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.00128815 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTAGCTA AGGTAGAAAG AATCGATCCT TCTGAGCTTG AACTGAATGA CAAGCTTATA
TTTATTAACC GTGTAACCAA GGTGGTTAAG GGCGGTAAGC GCATGGGTTT TGCGGCTTTG
GTGGTAACCG GAGATGGTAA AAATCATGTG GGTATCGGCG TGGGTAAGGC TAAGGAAGTT
CCTTCGGCTA TATCAAAAGC CAGTGCCAAC GCCAAGCGTA ATCTTTCACG TATACTTCTG
AATGGGACGA CTGTTCCCCA TGAAATTGTA TTTAAATATG GCGCCGCCCA GGTTTTACTG
AAGCCGGCTG CTCCCGGTAC CGGCATTATC GCAGGCGGTA GTGTTCGGGC AGTGTTGGAA
TCCACCGGTA TCAAGGATAT TCTGACCAAG TCTATGGGTT GTGGTAACAA GGCTAACGTT
GCCAAGGCTA CTTTAGGCGG GTTGACTGCT ATGCGGGATC CCAAAACCAC AGTTACCAAA
CGGCGCTCTT CTTTGAAAGA GGAGGCTGCT GGTGGCTAA
|
|---|
| Protein sequence | MLAKVERIDP SELELNDKLI FINRVTKVVK GGKRMGFAAL VVTGDGKNHV GIGVGKAKEV
PSAISKASAN AKRNLSRILL NGTTVPHEIV FKYGAAQVLL KPAAPGTGII AGGSVRAVLE
STGIKDILTK SMGCGNKANV AKATLGGLTA MRDPKTTVTK RRSSLKEEAA GG
|
|---|
| |