| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_429 |
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| Symbol | rplE |
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| ID | 8657370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. VS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013552 |
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| Strand | + |
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| Start bp | 405696 |
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| End bp | 406235 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | ribosomal protein L5 |
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| Protein accession | YP_003329912 |
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| Protein GI | 270307854 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000000169896 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTAAAA CATCTAAAAT TGTTCAATCC CAGCGCGCAT CCAAGTTCAA GGTGCAGCAC
CATAACCGTT GTAGCCGGTG TGGTCGTCCC AGGGGCTATA TTAACAGGTT TGGTTTGTGC
CGCATCTGTT TCCGCGAGCT GGCATTACAG GGGCAGATAC CCGGTGTCCG AAAGTCCAGT
TGGTAG
|
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| Protein sequence | MLKVEERYTN AVPELQKIFK YENIMQVPKL VKVVINTGVG EAVSNSKALE TAEADIVAIA
GQHPVITRAK RSVANFKLRA GMPIGLKVTL RGQRMYDFLN KLFFITLPRV RDFQGVSNTA
FDEHGNYTLG FKDHSVFPEI DFNKIEKPRG LEVCIVTTAN TPEEGKKLLE LLGMPFSKD
|
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