Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_416 |
Symbol | rpsJ |
ID | 8657357 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | + |
Start bp | 399854 |
End bp | 400162 |
Gene Length | 309 bp |
Protein Length | 102 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | |
Product | ribosomal protein S10 |
Protein accession | YP_003329899 |
Protein GI | 270307841 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000000000574411 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACTAAAC AAAAAATCAG GATAAAACTA AAGGGCTTTG ACCACAAGAT TCTCGACCAG TCTGCATTGC AGATTGTAGA GGCTCTGGAA CGGACAGGTG CTACTATATC TGGACCGGTT CCTTTGCCTA CCCGCATCCA GCGTTACAGT GTCATACGCT CATCCTTTAT TGATAAGGAT TCACAGGAGC AGTTTGAAAT CAGGACTCAC AAGCGTCTGA TAGATATAGT GGAAACTACG TCCAAGACCA TTGATGCCCT GACCAACCTG AACCTCCCGG CTGGCGTAAG TATAGATATT AAACTTTAG
|
Protein sequence | MTKQKIRIKL KGFDHKILDQ SALQIVEALE RTGATISGPV PLPTRIQRYS VIRSSFIDKD SQEQFEIRTH KRLIDIVETT SKTIDALTNL NLPAGVSIDI KL
|
| |