Gene DhcVS_406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhcVS_406 
SymbolaroA 
ID8657347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides sp. VS 
KingdomBacteria 
Replicon accessionNC_013552 
Strand
Start bp390832 
End bp392094 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content51% 
IMG OID 
Product3-phosphoshikimate 1-carboxyvinyltransferase 
Protein accessionYP_003329889 
Protein GI270307831 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.944064 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAC ATCTGGCTAA AAGCTTACCC GGCGGGGAAA TCGCCGTCCC TTCCTCAAAA 
AGCTATACCA TACGCGGTTT GGTTGCAGCT GCCCAGGCAA ACGGCCAAAG CCATATAATA
AGCCCGCTGG TTGCAGATGA TACGCTGGCT ACCAGACAGG TGCTTTCAGG GCTGGATATA
GATATAAACA CCAAGACTGA AGACGGAAGC TGGCAGATTA CCGGCAATAC CTTCAAAAAA
CCTGAAGGCA ACCTCTTCTG CCGCGAATCT GCCGCTACCC TGCGTTTTAT GTCAGCCGTG
TGTGCCAGAC TGCTATTTGA ATGCCACCTG CTGGCTGGGC ATTCCCTTAT GAGACGCCCC
ATGCTGCCCC TTATTCAAGC CCTGCACCAG CTTGGCATAG AAATAGAAAC CCGCGGCAAT
ACTACCGTAA TCAAGGGCGG TGAGATAACC CGTTCAAAGG TTAGCCTGCC GGGAAATATA
AGCTCTCAAT ATGTTTCAGC ACTTATGCTT ATGGCGCCTG CCTGCAAAAA CGGGCTGGAA
ATTCATCTGG CTACACCGCC GGCTTCATTG CCGTATTTAA AAATGACTAA ACAAACACTG
GAAAGCTTTG GTATCAAGGT CTTTTCTTCT ATAAACTGGC AGGAAATAAG TATCCCGCCC
CAGCCATACC TGCCCGCCAG ATACCGGGTA GAAGGAGATT GGTCTTCAGC CTCAAGCTTT
CTGGCACTGG GGGCTATTGC AGCCCCGGTA TTTGTATCCA ACCTGGATAC GGACAGCTTT
CAGGCTGACC GCATAATGAT AAAATACCTC ACCGAGATGG GGGCAGAAGC AGAAAGCGGC
CAAAACTGGG TAAAGGTAAG CCCCAAACCC CTTTCAGCTA TAAACGCAGA CCTTACCCAC
TCCATTGACT TGCTGCCTGC ACTGGCAGTA GCGGCCGCCT GTGCCAAAGG ACAAAGTATT
TTAAGCGGAG TCCGTCAGGC GCGTATCAAA GAGTCCAACC GTATCCGGGC GGTAAGCCAG
GGGCTTGTTG CTATGGGCAT AAATGTTACT GAAGAAGATG ACCGCCTGAT TATTGACGGC
GGATATCCCA AAGGCACAGA GATTGACAGC TTCGGAGACC ACCGTATTGC CATGGCTTTC
GGTGTACTGG GTGCGGTTGT GGGAGAAACC CATATTTCAG ATGCTGAGTG CGTATCCAAA
ACCTATCCCG GTTTCTGGGA GCAACTGGAA AGCCTCGGCG GAAAGGTAAT AAAAGATGTC
TAA
 
Protein sequence
MKIHLAKSLP GGEIAVPSSK SYTIRGLVAA AQANGQSHII SPLVADDTLA TRQVLSGLDI 
DINTKTEDGS WQITGNTFKK PEGNLFCRES AATLRFMSAV CARLLFECHL LAGHSLMRRP
MLPLIQALHQ LGIEIETRGN TTVIKGGEIT RSKVSLPGNI SSQYVSALML MAPACKNGLE
IHLATPPASL PYLKMTKQTL ESFGIKVFSS INWQEISIPP QPYLPARYRV EGDWSSASSF
LALGAIAAPV FVSNLDTDSF QADRIMIKYL TEMGAEAESG QNWVKVSPKP LSAINADLTH
SIDLLPALAV AAACAKGQSI LSGVRQARIK ESNRIRAVSQ GLVAMGINVT EEDDRLIIDG
GYPKGTEIDS FGDHRIAMAF GVLGAVVGET HISDAECVSK TYPGFWEQLE SLGGKVIKDV