Gene DhcVS_396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhcVS_396 
SymbolttdA 
ID8657338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides sp. VS 
KingdomBacteria 
Replicon accessionNC_013552 
Strand+ 
Start bp384555 
End bp385121 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content51% 
IMG OID 
Producttartrate/fumarate hydratase family, beta subunit 
Protein accessionYP_003329880 
Protein GI270307822 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.72991 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATATCCG GTATAAAACT GAATTCCCCG TTTAACCCTG CTGAACTGAA AAAACTGCAA 
GCCGGAGACA GGGTGCTGAT ATCCGGTATT ATATATGCCG CTCGTGATGC TGCCCATAAA 
CGGCTGGTGG AAGCCCTTAA TCAGGGCAAA CCGCTACCTT TTGACCTTAA AGGCCAGACT 
GTTTACTACA TGGGCCCTTC TCCTGCCAAA CCGGGTGAGG TTATAGGTTC AGCCGGCCCT 
ACTACCAGTA GCCGGATGGA CCGCTATACC CCGGAACTGC TGGATGCCGG ATTATTGGCT 
ATTATCGGCA AGGGCAACCG TTCGGCTGAG GTCAGCCGGG CTATTGTAAG TAAAAAGGCT 
GTTTATTTTA TATCGATAGG TGGGGCGGGG GCACTTCTCT CACAGCGTAT CAAGGAAAGC 
CGGATGGTGG CTTACCCTGA ACTTGGGGCG GAAGCTATAC TGGCGCTAAA GGTGGAGGAT 
TTTCCGGCTA TAGTGGCTAT TGACTCTCAG GGGAACAATG CTTTTACTCT TGGTCAGTCC 
ATTTACCGCA CGGCTAAGGA GGCCTGA
 
Protein sequence
MISGIKLNSP FNPAELKKLQ AGDRVLISGI IYAARDAAHK RLVEALNQGK PLPFDLKGQT 
VYYMGPSPAK PGEVIGSAGP TTSSRMDRYT PELLDAGLLA IIGKGNRSAE VSRAIVSKKA 
VYFISIGGAG ALLSQRIKES RMVAYPELGA EAILALKVED FPAIVAIDSQ GNNAFTLGQS 
IYRTAKEA