Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_380 |
Symbol | |
ID | 8657322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | + |
Start bp | 368493 |
End bp | 370148 |
Gene Length | 1656 bp |
Protein Length | 551 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | metallo-beta-lactamase |
Protein accession | YP_003329864 |
Protein GI | 270307806 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAAC CTAAACTGAA GATTGTACCT CTGGGTGGCC TGGGTGAGAT AGGCAAGAAT ATGATGTCTG TAGAATATGG GGAGGATATT ATCCTCATAG ACTGCGGGCT GATGTTCCCG GAAGAAGAAA TGCTGGGTAT AGATTTGGTT ATACCTGACA TTTCATACGT GCTGGAAAAC CGCGAAAAAG TGCGGGGCAT TGTAATTACC CATGGTCATG AAGATCATAT AGGGGCATTA CCTTATATAC TCCCCCAGAT AAATGTGCCT ATTTATTGCA CCAAATTGAC CCAGGGGCTT ATTTCGGTAA AGCTGAAAGA GGCCAAGCTG CTGCACCAGA CCAAGATAAA TGTTATCCCG TCTGACGGCA CTTTCAAGCT GGGTAAACTC AAAGTGGACT TTTATCCGGT CTGCCACAGT CTGCCGGACT CTGTGGGGCT GGTTATTCAG ACGCCTATCG GGGCGGTAGT CCACAGCGGT GATTTCAAAC TGGACTATAC GCCGGTAGAT GGCAAGCCCA CCAATCTGTC ACGTCTGGCT ATGCTGGGCT CGCGTGGAGT ACTGCTTTTG ATGTCAGACT CCACCCATGT GGAGCTGCCG GGTTATACCC CCTCGGAAAC TGTGGTGGGC GAAAATATTG ACCGTATTAT CGGGGCGGCT ACGGGGCGGG TACTGGTGAC CACCTTTGCT TCGCTTATTT CCCGCCAGCA GCAGGTTATT GATGCCGCTG CCAAATACGG GCGGAAGCTC TTTTTTGCCG GCCGCAGTAT GACTGAGATT CATAAAATGG CGGCTGAACT GGGTTACCTC AAAGTCCCCG AAGGTCTGGT TTGCAATATA GACCAGCTTC AGCGTGTGCC TCCGGAAAAA GTGGTTTTGA TGACTACCGG TTCTCAGGGT GAACCTACTT CCGCACTGGT GCGGATAGCC AACCGTGATT TCCGCCATGT CCATATAATG AAAGGTGATA CCGTAATTAT TTCGGCCTCG CCCATACCCG GCAATGAGTC ACTGGTGAGC CGCACTATAG ACAGCCTGTT CCGCCAGGGG GCTAAGGTAT TTTATGACCG CATAGCCAAG GTGCATGTTC ACGGGCATGC CAGCCAGGAA GAACTGAAGT TGGTGCTTAA TCTGGTCAAG CCCAAGTATT TTGTGCCTGT ACACGGCGAA TACCGCCATC TGACCATGCA TGCGGAGCTG GCCCGGACTA TGGGTGTTGC CCCGGAAAAT ACTTTTATTA TGGAAGACGG GGATATACTG GAGCTTAATA CCAAGTCCGG CCGTATTACC GGCAAAGTTC CCTCCGGCAA TGTTTATGTA GACGGTCTTA GCGTGGGTGA TGTGGGTGGG GTGGTACTCC GCAACCGCCG TATGCTTTCG CAGGACGGTA TTGTGGTGGC GATTGTAGCT ATCAACAAGC AAACCGGCAT GTTGGTGGGT AGGCCGGATA TTGTTTCCAG AGGTTTTGTT GACCCTGATG AATCTAAAGC CATGCTGGAT GCCAGCCGTG ACCTTATAAT CAAGCTGCTT GACCACGACG GTAAAGACAT TCCCGAAGGG GCTATGTATA ATGACGTCAA AGAAACACTG AACAAGTTTT ACTATGAGCA GACTAAACGG CGTCCTATGG TTATTCCGGT TATGGTAAAA GTGTAG
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Protein sequence | MAKPKLKIVP LGGLGEIGKN MMSVEYGEDI ILIDCGLMFP EEEMLGIDLV IPDISYVLEN REKVRGIVIT HGHEDHIGAL PYILPQINVP IYCTKLTQGL ISVKLKEAKL LHQTKINVIP SDGTFKLGKL KVDFYPVCHS LPDSVGLVIQ TPIGAVVHSG DFKLDYTPVD GKPTNLSRLA MLGSRGVLLL MSDSTHVELP GYTPSETVVG ENIDRIIGAA TGRVLVTTFA SLISRQQQVI DAAAKYGRKL FFAGRSMTEI HKMAAELGYL KVPEGLVCNI DQLQRVPPEK VVLMTTGSQG EPTSALVRIA NRDFRHVHIM KGDTVIISAS PIPGNESLVS RTIDSLFRQG AKVFYDRIAK VHVHGHASQE ELKLVLNLVK PKYFVPVHGE YRHLTMHAEL ARTMGVAPEN TFIMEDGDIL ELNTKSGRIT GKVPSGNVYV DGLSVGDVGG VVLRNRRMLS QDGIVVAIVA INKQTGMLVG RPDIVSRGFV DPDESKAMLD ASRDLIIKLL DHDGKDIPEG AMYNDVKETL NKFYYEQTKR RPMVIPVMVK V
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