| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_369 |
|---|
| Symbol | |
|---|
| ID | 8657311 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. VS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013552 |
|---|
| Strand | + |
|---|
| Start bp | 353725 |
|---|
| End bp | 355263 |
|---|
| Gene Length | 1539 bp |
|---|
| Protein Length | 512 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | carbohydrate kinase |
|---|
| Protein accession | YP_003329853 |
|---|
| Protein GI | 270307795 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000000136231 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATAA CCACAAGCAT ACGGATGAGG CAAATAGAAG ATGACTGTCA GAAACGGGGC
ATTAGCACCG AAACCCTGAT GGAAAATGCC GGCAGGGCGG TGGCGGTGTT TACCCGCCAT
CTACTGGAAC AGAAAAATGG CTCCCGTGTG CTGATACTTG CGGGTGCGGG CAATAACGGA
GGTGACGGAC TGGTTGCCGG ACGTTATCTG CAGAGCTGGG GCGAGGATGT AAGCATATTT
AAGCCCTTCA GGGACACCCA GAAAAATAAA ACTATTTCAG ATGGTTTAAA ACTCCCTGAA
AATATATTTA CGGATTTAAC AAAACTGGAA GAACGCCTGG CAGATGCCGA TATTGTGATA
GATGCTTTGC TGGGTACAGG CGCAAGCCGT CCTTTGGAAG GTATATACAA GCAAGCCCTG
CAAATGGCTG CCGCTGTCAA AAGTACCAGA ACAGAAATGC AGGTGCTGGC CGTAGATTTA
CCTTCTGGTT TGAATGCCGA TACAGGGCAG GCGGATGCGG CTTGCCTGAA AGCGGATTTT
ACCCTTTCAC TGGGCGTTGC TAAGCAGGGT CTTTTTACCC ACTGTGGGCT GGAGTTAAGC
GGGGTGGTTT CGGTGGTGGA TATCGGCATA CCGCCCGGAC TGACATCTGA TATCCATACC
CATTTGATTG AAAAAGATTG GGTAAGGGGT ATTTTGCCTG TTCGGTCTGC TCATGCCAAT
AAGGGCAGTT TTGGCCGGGT GATGATTGTG GCGGGAAGTA AACGCTATAT TGGGGCTGCT
ATGCTGGCCG GAAGCGCCGC TATGCGCACC GGTGCGGGCT TAGTTACTTT GGCGCTGCCG
CAAAGTTTAA CCGGGACTGT GTCCGCCAAA ATACCAGAAG CTATCTACCT GCTGTTGCCT
GAAGTATCTT GCGGCATCCC CGATAGCTCT GCTTCACGTC TTATCCTGAG TGAACTGGGT
AAATATGACG TACTTCTCAT AGGGCCGGGC CTTGGGCAGA GCGCATATTC CGCCAGACTG
GTTAGCGAAG TGCTTTCCAA TCTGCCCGCA GGGATAAAGG TTGTCATAGA TGCCGATGCT
TTAAATATAC TCGCCGCTAT ACCGGACTGG TGGCTTGAAT ATAAATTTGA TGCTATACTC
ACCCCTCACC CGGGTGAAAT GGGAAGGCTT ACTAAGACTA CTGCCGAATC TGTTCAGTCT
GACCGTTTCG GTATTTGCCG TGAATCTGCC CGCAAGTGGG GCAAGACAAT TATTCTGAAG
GGTGCCGGGA CAATTATCTC ATCACCGCAG GGTGAAACCC TGTGTAATCC GGCGGCTAAC
CCTGTGTTGG CCTCGGCCGG TACGGGTGAT GTACTTGCCG GAATAATAAG CGGTCTTCTC
GGGCAGGGGT TGAATCTTTT TGAGGCGGCG GGTTTAGGTG TTAACCTGCA CTCTGCTGCT
GCGGAAGCAC TGCGGAATGA GATGGGTGAT GCCGGTGTAC TGGCTTCGGA TTTACTGTTA
AAATTGCCTG TGATTATAAA AGAATTGAAA CAGGGCTAG
|
|---|
| Protein sequence | MEITTSIRMR QIEDDCQKRG ISTETLMENA GRAVAVFTRH LLEQKNGSRV LILAGAGNNG
GDGLVAGRYL QSWGEDVSIF KPFRDTQKNK TISDGLKLPE NIFTDLTKLE ERLADADIVI
DALLGTGASR PLEGIYKQAL QMAAAVKSTR TEMQVLAVDL PSGLNADTGQ ADAACLKADF
TLSLGVAKQG LFTHCGLELS GVVSVVDIGI PPGLTSDIHT HLIEKDWVRG ILPVRSAHAN
KGSFGRVMIV AGSKRYIGAA MLAGSAAMRT GAGLVTLALP QSLTGTVSAK IPEAIYLLLP
EVSCGIPDSS ASRLILSELG KYDVLLIGPG LGQSAYSARL VSEVLSNLPA GIKVVIDADA
LNILAAIPDW WLEYKFDAIL TPHPGEMGRL TKTTAESVQS DRFGICRESA RKWGKTIILK
GAGTIISSPQ GETLCNPAAN PVLASAGTGD VLAGIISGLL GQGLNLFEAA GLGVNLHSAA
AEALRNEMGD AGVLASDLLL KLPVIIKELK QG
|
|---|
| |