Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_361 |
Symbol | |
ID | 8657303 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | - |
Start bp | 347354 |
End bp | 348175 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | |
Product | amino acid ABC transporter, permease protein |
Protein accession | YP_003329846 |
Protein GI | 270307788 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00000992364 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAGAAG ACAAAATTAA GCCGCCTGAA AAAATAAACC TGATACCGGG GGCTGAACCG TCCAGCCGTA TGGATCCCTG GTGGTGGTTG GTAGCCGGGG TTTTTGCTCT GGCCGGCGGC CTTATGCTGT TTAAACCTGA TCCCTTTCTG GATATCTTCA AGTATGTCTG GGTAGGTATC GGCATAACAG TTCTGGTGGC AGTTGTATCC TATTTCCTGA TGCTTATTTT CGGTTTATTC GGCGCTTTAG GGCGTTTATC CAAAAACACC ATCCTGCGCG GACTGGCTAC ATTTTATGTT GAAATAGTAC GCGGTATTCC CCTGCTGGTG CAGCTTATCT GGTGGTACTT CGCCTTCCCG GTCATAATCC AGAGTATAGG GCAAGGTCTT AATTTCGGCC CTATGATGAA TTATCAGGCA AACCCCATTG TTATGGCTAT CTGGGGTATG ACCTTCTGCT ACGGCGCATA TATGAGCGAA ATCTACAGAG CCGGCATCCA GAGCATACCC AAAGGACAAA TGGAAGCTGC CCGCAGCCTT GGCATGAGTC ATACTCAAGC AATGAGATTT GTAATACTGC CTCAGGCACT GAGAGTAGTC CTGCCACCCA TGGGCAACGA ATTTATTTCA CTTCTTAAGG ACACTTCACT GGTATCCACC GTAGCCGTAG CAGACATGGT AAGGCTGGGG CGGGAATTTA CCGCCACCAA TTTCAACCCT ATTGAAGTAT GGAGTATGAT TGCCCTGCTC TACCTGATAC TTACGCTCCT ATCCAGCCGT CTGATAAACT ACATAGAAAA GAAAACTGCA TTTTCAAGAT AA
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Protein sequence | MVEDKIKPPE KINLIPGAEP SSRMDPWWWL VAGVFALAGG LMLFKPDPFL DIFKYVWVGI GITVLVAVVS YFLMLIFGLF GALGRLSKNT ILRGLATFYV EIVRGIPLLV QLIWWYFAFP VIIQSIGQGL NFGPMMNYQA NPIVMAIWGM TFCYGAYMSE IYRAGIQSIP KGQMEAARSL GMSHTQAMRF VILPQALRVV LPPMGNEFIS LLKDTSLVST VAVADMVRLG REFTATNFNP IEVWSMIALL YLILTLLSSR LINYIEKKTA FSR
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