Gene DhcVS_361 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhcVS_361 
Symbol 
ID8657303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides sp. VS 
KingdomBacteria 
Replicon accessionNC_013552 
Strand
Start bp347354 
End bp348175 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content47% 
IMG OID 
Productamino acid ABC transporter, permease protein 
Protein accessionYP_003329846 
Protein GI270307788 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000992364 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAGAAG ACAAAATTAA GCCGCCTGAA AAAATAAACC TGATACCGGG GGCTGAACCG 
TCCAGCCGTA TGGATCCCTG GTGGTGGTTG GTAGCCGGGG TTTTTGCTCT GGCCGGCGGC
CTTATGCTGT TTAAACCTGA TCCCTTTCTG GATATCTTCA AGTATGTCTG GGTAGGTATC
GGCATAACAG TTCTGGTGGC AGTTGTATCC TATTTCCTGA TGCTTATTTT CGGTTTATTC
GGCGCTTTAG GGCGTTTATC CAAAAACACC ATCCTGCGCG GACTGGCTAC ATTTTATGTT
GAAATAGTAC GCGGTATTCC CCTGCTGGTG CAGCTTATCT GGTGGTACTT CGCCTTCCCG
GTCATAATCC AGAGTATAGG GCAAGGTCTT AATTTCGGCC CTATGATGAA TTATCAGGCA
AACCCCATTG TTATGGCTAT CTGGGGTATG ACCTTCTGCT ACGGCGCATA TATGAGCGAA
ATCTACAGAG CCGGCATCCA GAGCATACCC AAAGGACAAA TGGAAGCTGC CCGCAGCCTT
GGCATGAGTC ATACTCAAGC AATGAGATTT GTAATACTGC CTCAGGCACT GAGAGTAGTC
CTGCCACCCA TGGGCAACGA ATTTATTTCA CTTCTTAAGG ACACTTCACT GGTATCCACC
GTAGCCGTAG CAGACATGGT AAGGCTGGGG CGGGAATTTA CCGCCACCAA TTTCAACCCT
ATTGAAGTAT GGAGTATGAT TGCCCTGCTC TACCTGATAC TTACGCTCCT ATCCAGCCGT
CTGATAAACT ACATAGAAAA GAAAACTGCA TTTTCAAGAT AA
 
Protein sequence
MVEDKIKPPE KINLIPGAEP SSRMDPWWWL VAGVFALAGG LMLFKPDPFL DIFKYVWVGI 
GITVLVAVVS YFLMLIFGLF GALGRLSKNT ILRGLATFYV EIVRGIPLLV QLIWWYFAFP
VIIQSIGQGL NFGPMMNYQA NPIVMAIWGM TFCYGAYMSE IYRAGIQSIP KGQMEAARSL
GMSHTQAMRF VILPQALRVV LPPMGNEFIS LLKDTSLVST VAVADMVRLG REFTATNFNP
IEVWSMIALL YLILTLLSSR LINYIEKKTA FSR