Gene DhcVS_36 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhcVS_36 
SymbolgltA 
ID8656993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides sp. VS 
KingdomBacteria 
Replicon accessionNC_013552 
Strand+ 
Start bp32744 
End bp34141 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content48% 
IMG OID 
Productglutamate synthase (NADPH), homotetrameric 
Protein accessionYP_003329543 
Protein GI270307485 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.800256 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGCTG CCTCTGAGTC TCCGCGGTTT CTGGTTGACC AGAATGTGGG CAAGCTGGCT 
GTTTACCTGA GAATGCTGGG TTTTGACGCC CGCCGTTTTG GCAGCGGGCC CGATAAGCAG 
CTTGTTTCTG AAGCTCTAAA TGAAGGGCGG ATAATACTTA CCCGTGACCA CCTGCTTGCG 
GAAAGGCGGC TGGTCAAAAA GGGTAGTTTG AAGGTCACGC TTTTTAAAAC TGAAGTGGCA 
GAAGACCAGC TCCGGCAGCT TTTATCTGAT ATCGTGTTTA GTTCATTTAT TTGTCCTTTT 
AGCCGCTGCA TAGAGTGCAA TTACCCGCTT TATCCTGTTA TGAAAGACAC TCTGTCAGAG 
AGAGTGCCTC CATACGTTTA CCAGAATCAG ACTGAGTTCA AAGAGTGCCA CCATTGCGGA 
CGGATTTTCT GGAAGGGAAG CCACTGGCAA GCCATGCAGG AATTATTAAG AAGAGTGGGT 
GTTGATAATA ACACCTCTTG CTGA
 
Protein sequence
MAKAGLNRID MPKQAVNDRI QNFSEVATGY TPADAHTEAA RCLQCKKRYC VEGCPVNIDI 
PEFILALRDG DMPEAARILK KTNSLPGVCG RVCPQETQCE QACILNKKEA SIAIGRLERF 
VADWEREHSA EVNLPKSLKP KSGKKAAVVG AGPAGLTAAA ELARLGHDVT LLESLHTAGG 
VLMYGIPEFR LPKNIVQGEI EYVKSLGVKL ELNSVAGRLF SLDDLFKQGF QAVFLATGAG 
LPLFLNVQGE NLSGVYSANE FLTRVNLMKA YNFPSSDTPV KKGKKVAVIG GGNVAMDAAR 
CALRLGAEEV SIVYRRSELE LPARKEEVDN AREEGIKFHF LTSPVRFLAN EQGQVRAMDC 
QKMELGEPDA SGRRRPIPVD GSEFEMDIDL AIIALGTRPN PLVMQSAPDL QVNANGTVAA 
DTSGQTSHKA VWAGGDIVTG SDTVISAMGA AKRSAVVIDE YLRSL