Gene DhcVS_354 details

Gene Information

• Locus tag: DhcVS_354
• ID: 8657296
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. VS
• Kingdom: Bacteria
• Replicon accession: NC_013552
• Strand: +
• Start bp: 342614
• End bp: 343381
• Gene Length: 768 bp
• Protein Length: 255 aa
• Translation table: 11
• GC content: 48%
• Product: ABC-2 type transport system, permease protein
• Protein accession: YP_003329839
• Protein GI: 270307781

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.216034
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACTGGC CTACTTATCG TGCTTTTTAT ATGTGGCTTC GGAACTACAA CGTCTTTATC 
CGTTTGTTCT GGTCTATTGC GCCGGGGTTT GTTATTGAAC CGGTAGTGCT TCTGGTAGCA 
CTTGGTTTCG GCTTCGGGTC ATTTATAGGG GATATAAACG GCCAGCCTTA TATGGAATTT 
ATCATACCGG GTGTTATTGC CAGCTATGCC ATGACCAGCG CTACCTTTGA GTGTACCTAT 
AACGTCTTTT TCCGCATGGA TTTCCGCAAA ACCTATGACT CCATACTGGC TACCCCAATG 
AATATAAGTG ACGTGGTAAC CGGTGAGGTC TTATGGGGGG CTACCCGCTC CATCATAACT 
GCGTGCATTA TCCTGCTGGT GGCGGCCCTG TTCGGTGTTA TCCATTCGCC GCTGGCTCTG 
CTGGCACCTG TTTTTGCGGT GCTGGAAGGC ATCATGTTTG CCAGTATGGG TGTTTTCTTT 
GCTTCTATAG TCCCCTCTGT TTACAGCTTT AACTATTATT TTACCTTGTT TATCGGCCCG 
ATGACTTTTT TCAGTGGGGC TTTTTTCCCG GTTTCCAGCT TTCCGGAAAC AGTGCAGGTT 
ATTTCGAATA TTGTGCCTCT TACCCCGGCT GTCAGCCTTA TACGGGGGGC GGTCAGTGGT 
GACTTTGCGG GGGTAAATGT GGTAATCTCG TTGCTGGCGG TTATCGGGGT GTCAGCCGCC 
TTTTATATAG CTACTCTGTT TAGCATGAAA CGCCGGGTTA TGGAATAA 

 

Protein sequence

MNWPTYRAFY MWLRNYNVFI RLFWSIAPGF VIEPVVLLVA LGFGFGSFIG DINGQPYMEF 
IIPGVIASYA MTSATFECTY NVFFRMDFRK TYDSILATPM NISDVVTGEV LWGATRSIIT 
ACIILLVAAL FGVIHSPLAL LAPVFAVLEG IMFASMGVFF ASIVPSVYSF NYYFTLFIGP 
MTFFSGAFFP VSSFPETVQV ISNIVPLTPA VSLIRGAVSG DFAGVNVVIS LLAVIGVSAA 
FYIATLFSMK RRVME