| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_340 |
|---|
| Symbol | thiL |
|---|
| ID | 8657282 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. VS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013552 |
|---|
| Strand | - |
|---|
| Start bp | 330561 |
|---|
| End bp | 331571 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | thiamine-monophosphate kinase |
|---|
| Protein accession | YP_003329825 |
|---|
| Protein GI | 270307767 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0000967577 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGTTT CTGACATAGG CGAATGCCAG CTGATAGACA AGCTGAACAA TCTTTTACAC
CAAAAGTCTG CTGTAAACAC CCCTGCCCGT GAAAACTTAA TAATTGATAT TGGTGATGAT
GCCGCTGTTT TCCGGCCGCA GGGATATCAG CTGGTCACCG TGGACAGCCT GATTGAAAAC
GTACATTTCA ACCGCAACAT GCTTTGCTGG GCAGATTTGG GTTACAAAGC CATGGCAATA
AATATGAGCG ATATTGCCGC CATGGGGGGA GTCCCTCAAT ATGCCGTAGT GAATATTGAC
CTGCCGCCGG ATACGCTCGT TTCCAGCGTG ACAGACTGCT ATAACGCCAT GTACAGTCTG
GCTGAAAAAT ACCAGACTGC TATAATAGCC GGTGATACCA ACCAGTCATC CATAATAAAC
CTGGCTGTCA CTTTGCTGGG TTCGGCGGAA AACCCGAACC GCCTGCTTAC CAGAAATGCC
GCTCAGGCAG GGCAGAAAAT AGCTGTTACC GGTTATCTGG GCAGTGCTGC TGCCGGTTTG
GATATGCTGC TAAACCAAAC AAAAGTCCCT GACGAAAACC GTGAGATATT TTACCGCTCC
TTTTACCGCC CTGAACCGCG GATAAATGAA GCCAGGTTGC TGGTTAAAGA GGGCGTCCGT
TGCTGTATAG ATATTAGTGA TGGGCTGGTG ATTGACCTTG GGCATGTACT CAGGCAGAGC
CGGGTAAGTG CCAGAATTGA TCTTGGTAAG CTGCCCCTCC ACCCCAGCCT GCGTCTTTGC
TACCCCCTTC AAGCCCAAAA CATGGCCCTT TACGGGGGTG AAGATTACGA ACTGTTGTTT
ACCGCCTCTG CCGAGGTGAT AGAGCAAATT TCGGTGCAGA GTCCTATACC GGTTACTGTC
ATAGGTGAGA TTATTCCGGG TAAACCGGAG GAATTAAGAT TAATGGATAA AGATGGGAGG
GCCCTTCAGC CGGGAAAGAA CGGCTGGGAG CATTTTAAGA AACCAAAATG A
|
|---|
| Protein sequence | MKVSDIGECQ LIDKLNNLLH QKSAVNTPAR ENLIIDIGDD AAVFRPQGYQ LVTVDSLIEN
VHFNRNMLCW ADLGYKAMAI NMSDIAAMGG VPQYAVVNID LPPDTLVSSV TDCYNAMYSL
AEKYQTAIIA GDTNQSSIIN LAVTLLGSAE NPNRLLTRNA AQAGQKIAVT GYLGSAAAGL
DMLLNQTKVP DENREIFYRS FYRPEPRINE ARLLVKEGVR CCIDISDGLV IDLGHVLRQS
RVSARIDLGK LPLHPSLRLC YPLQAQNMAL YGGEDYELLF TASAEVIEQI SVQSPIPVTV
IGEIIPGKPE ELRLMDKDGR ALQPGKNGWE HFKKPK
|
|---|
| |