Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_327 |
Symbol | |
ID | 8657270 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | + |
Start bp | 318985 |
End bp | 319749 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003329813 |
Protein GI | 270307755 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0111303 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCAAAT TTATCGACAA GCTTAAAAAT GTATCCAAGG GCTATGTACG CCCTATGGGT TTTAACGCGG TTGCCTCTGT TCCCCAGCCT AAAATGCTGC TCGCGGCGGA ACTGGGTCTA GAAGACCTGA CGGATAAAGA AGCATTTGGC GGGGCGGATG TAGTGATTGT TTCCGTCGGC AAAGCTAGTG CCAAAAAACT GAAAGAGACT GCAGATATGC TGGGCGATAC AATCTGGGGT GTAGCGCTGG GTGATAAAGC AGCTGATGCC GAAAAAATGG CCAAGGCCGG TGCGGATTTT GTAGTTTTCA GCCCGGATGC CGAGGTATCA CCCCTGACGG CTCTTGAAAA GACCGGCAAA ATAATTATGC TTGAAAACAA CCTGACTGAT TTTATGATAA GGGCGGCGGA CTGTCTGTCT GTAGGGGCGG TTATCGTGGA TAACCAGCCG GATGCTTTGG CCCTCAGCTG GCGGAAGATT ATGCTCTACC AGCGTTTTGC GGATATATTG TCAAAACCAT TTCTGGTAAG GGTAAGTTCA AATATCACGC TTTCGGAGCT TCAGTCACTC TGGGCTTTGG GTATAGATGG AGTGCTGATA AGCGGCAGTA CAGGCTTGAA AGAACTGCGT ACGCTGATAG ACGGGGCTGA ATGGGCGGTT AAACGCAAAC GCGGGCATAT GAGTGCCATT GTGCCTTCTC TGAAAATGCC TGCGTCCGAA TCAGTTGCAC CTGAAGAACC CGAAGAACCA GATGAAGATG ATTAG
|
Protein sequence | MSKFIDKLKN VSKGYVRPMG FNAVASVPQP KMLLAAELGL EDLTDKEAFG GADVVIVSVG KASAKKLKET ADMLGDTIWG VALGDKAADA EKMAKAGADF VVFSPDAEVS PLTALEKTGK IIMLENNLTD FMIRAADCLS VGAVIVDNQP DALALSWRKI MLYQRFADIL SKPFLVRVSS NITLSELQSL WALGIDGVLI SGSTGLKELR TLIDGAEWAV KRKRGHMSAI VPSLKMPASE SVAPEEPEEP DEDD
|
| |