| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_300 |
|---|
| Symbol | |
|---|
| ID | 8657244 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. VS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013552 |
|---|
| Strand | - |
|---|
| Start bp | 294180 |
|---|
| End bp | 295553 |
|---|
| Gene Length | 1374 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003329789 |
|---|
| Protein GI | 270307731 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGATAAATA GACTTCGCCC CTACCAGCAG GATATTGCCA AAGCGGTATT ACAAAGCATA
TTTAACCGGC AGGGGCAAAC TTTCAGTGTG GAAATAGCCC GGCAGGGCGG TAAAAATGAA
CTTTCGTCCC AACTGGAACT TTTGCTGATG ACTCTTTTCA TGTTTGAGCC TAAAAATCTG
GTTAAATGCG CCCCTACCTT TAAACCCCAG CTTAATATCT CCATGATGAG GCTGAAAGAC
CGTCTGAATG AGGCCGGCTT TACAGAGATA TATCATACTG AGGGCGGGTA TATTATCCGA
CTGAATCAAG CCAGAGCCGT TTTCCTTTCC GCAGAACCCA GTGCCAACGT GGTGGGCAAT
ACCGCCCACC TGCTGCTTGA GGTAGATGAA GCCCAAGACG TAAGCAAGGA GAAGTACACC
AAGGAATTTA AACCCATGGG TGCCACCACC AATGTTACCA CTATTCTTTA CGGCACTACC
TGGGACAACG CCAGTCTGCT TGAAGAAATA AAAAGGCAGA ATATAGAAAA AGAACAAAAA
GACGGGCTTA AACGGCATTT CCGCTATGAC TGGGAAGAAG TTGCCGCCCA CAATCCGGCT
TATCTGGCAT ATGCCCTGTC CGAAAAAGAC CGGCTGGGAG AGAACCATCC CCTGTTTTTG
ACTCAGTACC GCCTGCTTCC GGTAAGCGGC GGCGGCGGCA TGTTCAGCAC CGAACAGCTT
GATTTGCTTA AAAGCAGCCA CCCCTGCCAA ATCTACCCCG AAAATGGCAA GGTATATGTA
GCCGGGTTGG ACCTGGCAGG TGAAGATGGG CAAATAGATG GTGATTTGCC CGCAACTGTA
AACCTGCGGC GGGATTCAAG CGTGCTTACA ATTGCAGAGC TGGATTATAC ATTTGCCAAA
GCACCCTGTA ATCTGCCTCA ACTAAAGCTG GTCTGCCATT ACAGCTGGCA GGGGGCGCGC
CATGCTTTGC TCTATGAAAA ATTGGTGGAA CTGCTGGGCA AGGTCTGGAA ATGCCGCAAA
GTGGCAGTAG ATGCCACCGG GTTGGGACAG CCGGTAGCTT CCTTCCTGAG GGAATCACTG
GGCAGTCGTA TTCTGCCGTT TGCCTTTCAG CCGTCTTCAA AATCACGGCT GGGTTTTAAT
TTGCTTTCGG CTGTAAATTC AGGCAGATTG AAGATGTATG CATCCAATGG CAGTGCCGAA
TATGCCCTGT TCTGGCAGGA AATGGAGCTG GCACGGGCAG ACTACCGCCA AAGCCAGCAG
ATGAATTTTT ACGTAGAAAC CACCCGCGGG CACGATGACT ACCTGATGAG TCTGGCGCTC
TGCCTGGAGG CAGCCGAAGC CTATTCCCCC AGAAGTGCCA AAGGCTCAAA CTGA
|
|---|
| Protein sequence | MINRLRPYQQ DIAKAVLQSI FNRQGQTFSV EIARQGGKNE LSSQLELLLM TLFMFEPKNL
VKCAPTFKPQ LNISMMRLKD RLNEAGFTEI YHTEGGYIIR LNQARAVFLS AEPSANVVGN
TAHLLLEVDE AQDVSKEKYT KEFKPMGATT NVTTILYGTT WDNASLLEEI KRQNIEKEQK
DGLKRHFRYD WEEVAAHNPA YLAYALSEKD RLGENHPLFL TQYRLLPVSG GGGMFSTEQL
DLLKSSHPCQ IYPENGKVYV AGLDLAGEDG QIDGDLPATV NLRRDSSVLT IAELDYTFAK
APCNLPQLKL VCHYSWQGAR HALLYEKLVE LLGKVWKCRK VAVDATGLGQ PVASFLRESL
GSRILPFAFQ PSSKSRLGFN LLSAVNSGRL KMYASNGSAE YALFWQEMEL ARADYRQSQQ
MNFYVETTRG HDDYLMSLAL CLEAAEAYSP RSAKGSN
|
|---|
| |