| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_288 |
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| Symbol | |
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| ID | 8657232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. VS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013552 |
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| Strand | + |
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| Start bp | 283283 |
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| End bp | 284962 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | |
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| Product | radical SAM domain protein |
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| Protein accession | YP_003329777 |
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| Protein GI | 270307719 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000164247 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCGTCT GCTGCGTAAC TGCTGGAAAC AGCAAAGAAA CAACTATGGC ACGCAAAGAC
CGCCTCAAGA ATCGTAAAGA ACTTTCACGC ACACGGGTTT CTTATGCCTC CTCAGAGAGG
GTAGCCGGTG AAAGCGGAGT TGTTATAAAG GATTGGGGTG GCAGATTACC TCTGGCAGTT
GCTTATCCCA ACTCTTACTA CGTGGGTATG TCAAATTTGG GGCTTCATAC CCTTTACCGT
TTGATAAATA ACTATCCTCA ATATCTGGCG GAGAGGTTTT TTTGGGAAGG CGGTGCCGCC
AAAGGCCGCC CGACCTTAAG TGTGGAATCA CGCCGCCCGT TTACTGATTA TGTATCTATT
TTGTTTACCC TTTCTTACGA ACTGGATTTT CTGAATATAC CCTCCATGCT GGCTGATTGC
GGTATGCCGC TCTATGCACG TGAAAGGAAC GAGGCTTTCC CGCTGGTTAT CGGCGGGGGT
GCCTGTGTAA TGTCTAACCC CGCACCGGCA GCTGATTTTT TTGACGTATT TTGCATAGGT
GAGGCCGAGG CTATTCTGCC TGAGTTGTTG CCTGTGCTTG CCGAAATGGC AGGTGAACCT
AAAAGACTGG TTTTGGAACG TCTGGCAAAA ATATCCGGTT TATATGTGCC GTCTCTGCCG
CCGGAAAAAC CGGTGGAAAG AGTATTTCCA TCTGAACTTA CTCAAGGGGT AGGAACGGCA
GTTTTCAGCA AGGCAACCGA ACTGGGAGAG ATGTACCTGA TGGAAGTAGA ACGCGGCTGC
GGACATCAGT GCCGGTTTTG TCTGGTGGCG GGGGTGTTTT GTCCTTTGCG TTACCGCCCT
TTGGAGTTAC TTTTGAAACA GGCTAAAGAA GGTATGCTTG AGCGAAAGAG GATAGGTCTG
GTAGGGCCGG TAGTGAGTGA TCACCCTCAG GTGGCGGAGT TGATTTCCTG TTTGCGGGGT
ATGGGTGTCG GTTTAAGCAT AAGTTCACTT CGGATAAAGC CGTTGTCTGA AAAAATGCTT
ACCGAACTGG CACTTTCGGG CGTTTCCAGT CTGGCTATGG CACCGGAGGC CGGTTCTGAA
AGGCTACGGA GGATTATCCG CAAAGGGATA ACCGAAGATG ACATAATACG GGCAGCGGCT
TTGGTGGCGG AAAAAGGTTT CCGTCAACTG AAGTTTTATT TCATGCTGGG GCTGCCGGGT
GAGACTGATG AAGATATAGA AGAAATGATA AAGCTGGCCG AAAAAGCCCA GCAGGTTATG
TCTGCTGCGG GGCGGGGACT AAGATTAAGC CTGAATATTG CCCCGTTTGT GCCCAAGCCC
TCCACCCCGT TTCAGTGGCT GGGTATGGAA GATGCAGTGC TGGTAAAAAG GCGGCTGGAT
ATAATACGCC TCCGTCTGGA GGGGCAGGGG ATAGAGGTCA GGGCTGAAAG CCCGGAAATG
TCCCAGATAC AGGCGGTGCT TTCCCGGGGT GATGTTAGTC TTTCAAAACT GCTGGTGGCT
GCGGGGGGTG ACTCTCTGGC CTGCTGGAAG CGGGCAGCCA AGTCACTTGA GGTAGACAGC
CCATCTTTGG CTAAAACAAG GTTTGATTTG GCAGATAAAC TGCCCTGGTA TATGCTGGAA
AACCCGAAAC AGAGACAAAA ACTGGAAACT GAGTATAAAG CGGCGTTTAA GGAAATATAA
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| Protein sequence | MGVCCVTAGN SKETTMARKD RLKNRKELSR TRVSYASSER VAGESGVVIK DWGGRLPLAV
AYPNSYYVGM SNLGLHTLYR LINNYPQYLA ERFFWEGGAA KGRPTLSVES RRPFTDYVSI
LFTLSYELDF LNIPSMLADC GMPLYARERN EAFPLVIGGG ACVMSNPAPA ADFFDVFCIG
EAEAILPELL PVLAEMAGEP KRLVLERLAK ISGLYVPSLP PEKPVERVFP SELTQGVGTA
VFSKATELGE MYLMEVERGC GHQCRFCLVA GVFCPLRYRP LELLLKQAKE GMLERKRIGL
VGPVVSDHPQ VAELISCLRG MGVGLSISSL RIKPLSEKML TELALSGVSS LAMAPEAGSE
RLRRIIRKGI TEDDIIRAAA LVAEKGFRQL KFYFMLGLPG ETDEDIEEMI KLAEKAQQVM
SAAGRGLRLS LNIAPFVPKP STPFQWLGME DAVLVKRRLD IIRLRLEGQG IEVRAESPEM
SQIQAVLSRG DVSLSKLLVA AGGDSLACWK RAAKSLEVDS PSLAKTRFDL ADKLPWYMLE
NPKQRQKLET EYKAAFKEI
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