Gene DhcVS_193 details

Gene Information

• Locus tag: DhcVS_193
• ID: 8657146
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. VS
• Kingdom: Bacteria
• Replicon accession: NC_013552
• Strand: +
• Start bp: 191503
• End bp: 192300
• Gene Length: 798 bp
• Protein Length: 265 aa
• Translation table: 11
• GC content: 46%
• Product: LmbE
• Protein accession: YP_003329692
• Protein GI: 270307634

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 0.599254
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATCCCA TTAAAAAGAA CAGGATAGGC CTGCTTTTTA GCCTGATAGT TATCTGTCTG 
GCCGGGGTAT CCTTTTTCTT CTGGGCTGTG CCGGAAGTAC TTGGTCAGCA ATATATCAAA 
CTCCTTGACT GTCTGCCGTT ACCACAAGCG GGAGAACGGA TACTTGTATT TTCCCCCCAC 
CCGGATGATG AGACTATTGC ACTGGGCGGA TATATTGCCA GTGCTTGTCA GGCTGGTGCG 
GAGGTAGAAA TTGTACTGGT TACTGACGGC AGCAAATATA CTCCTCGGGA GACCCGCTAT 
GCGGAATTTG AACACGCCTG CCATCTTTTG GGGGTTAGCG AAGATAATCT GGTGTTTCTG 
GGTTTTAAAG ATGGCAGTTT GAATTCATTA TCGCTTAGCA GTCTGGCTGC TTCATTTGGG 
AATTTGATAA ACAGTTTTCA GCCGGATATC GTGTTTTATC CCCACCACAA GGATGCCCAT 
GCTGACCATG CGGCTGTAAG CAGAGCAGTC GGTCAGTATC TTAAAACTAT TCCCGGTATA 
CAGAGGTATG AATATCTGGT GCATTACCGG ATATTATTCC CTCAGCCGCG GATTTTTAAC 
CAGAACTTGT ATCTGCTGCC GCCGCTTACA CTGGTCAATG AAGACCAGAA TTGGCTTCGC 
TTTGATCTTT CTGAAGCCCA ATTGGAGCAA AAAATAGCAG CCATGAGTGC TTATGAGAGC 
CAGCTGAAAA ACCCGTTTTT AAATCCCCTT ATGCAGAGTT TTATCCGCCA GAATGAGCTG 
GTTTGCCTGC CAAATTGA 

 

Protein sequence

MNPIKKNRIG LLFSLIVICL AGVSFFFWAV PEVLGQQYIK LLDCLPLPQA GERILVFSPH 
PDDETIALGG YIASACQAGA EVEIVLVTDG SKYTPRETRY AEFEHACHLL GVSEDNLVFL 
GFKDGSLNSL SLSSLAASFG NLINSFQPDI VFYPHHKDAH ADHAAVSRAV GQYLKTIPGI 
QRYEYLVHYR ILFPQPRIFN QNLYLLPPLT LVNEDQNWLR FDLSEAQLEQ KIAAMSAYES 
QLKNPFLNPL MQSFIRQNEL VCLPN