Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_188 |
Symbol | |
ID | 8657141 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | + |
Start bp | 186624 |
End bp | 187535 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003329687 |
Protein GI | 270307629 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.000488554 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTTT TACGCCGTTA TGATTTTTAT CTGCTGATAC TGTTTATAGG GTTAGGGGTG CTGGCCTTTA ACGGTGGCTG GGTACTGCCT TTGCGGCTGT TATTTGGCCT GCCGCTGGTC CTGATAGTGC CGGGTTATGC CCTGGCATCA GTCCTGTACC CCTCTAAGCT TAGCCTCAGC CGCTCCTCAC GGCTTATGGT TAGTCTGGCA CTCAGTCTGT CAGTCTCCAT GCTGGCAGGG CTGGTTTTAA ACTATACGGT TGGGCTGGGG CAGGAGAGTG TTCTGTGTAC TCTCTGCAGT TTAAGCCTTA TATTTTGTCT TGCGGCCATT GGCAGAAGGC AGCGTTTGCC GCCTGACGAA AGACCCGGTC TGATACTAAT CCCGCCTGAC ACTAAAAAAC AGGTCTCCGG AAATACCTTC CAGGTTTTCT TGAATATGCT TCTGGCAGTT TACCTGCTGG GAGTGGGCGG ATTTGCCGTA AAACAACTGG TACAAGTTTA TTCGCCGGCG GAGTTTACTC AGTTTTATAT GCTGGGTATA GATGATACTG CCGAAAACTT TCCAAACATG TTTTTTCTGG ATAACGGGCA GGTGACTGAA GTGCAGTATG GCAACCGGCC TGCGGTAGAG GCTGTTTCTG CCTGCCTGAA GCTGGTCATC TCCAATAGCG GCCAGCTTGA CATAGTTTAT AGGGTGGAAG CTCTACTTAA CGGCCATCTG TACAAGTTTT CCTTTGGCGA TGGCACAGAA TTTGACGGTT TTATAGACGT GCCTGCAAGT GTTGTTAATT CACTTGAGCT CTATTTTGCT CCGATTGAAC CGGGTGATAA CCAGTTACTG GAAATTTGGC TTTATTCGGG TGACACCCCG GTATTCTCCC AGCCTCTTAA ACTTGTCTTC AGTACGGACT AA
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Protein sequence | MNFLRRYDFY LLILFIGLGV LAFNGGWVLP LRLLFGLPLV LIVPGYALAS VLYPSKLSLS RSSRLMVSLA LSLSVSMLAG LVLNYTVGLG QESVLCTLCS LSLIFCLAAI GRRQRLPPDE RPGLILIPPD TKKQVSGNTF QVFLNMLLAV YLLGVGGFAV KQLVQVYSPA EFTQFYMLGI DDTAENFPNM FFLDNGQVTE VQYGNRPAVE AVSACLKLVI SNSGQLDIVY RVEALLNGHL YKFSFGDGTE FDGFIDVPAS VVNSLELYFA PIEPGDNQLL EIWLYSGDTP VFSQPLKLVF STD
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