| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_183 |
|---|
| Symbol | |
|---|
| ID | 8657136 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. VS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013552 |
|---|
| Strand | + |
|---|
| Start bp | 183190 |
|---|
| End bp | 184497 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003329682 |
|---|
| Protein GI | 270307624 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.277985 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGTTA AAGAGATTGT GGTAATAGGT GCGGGGGCAG GCGGGCTTAT GGCGGCAGGC
CGTGCGGCTG AGTGCGGCGG CAAAGTAATC CTGCTGGAAA AGACCGAACA GCCGGGCAAG
AAAATGCTTA TTTCGGGGCA GGGCAGGTGC AATATTTCCA ACAGCCGGGA TATTGCCGAA
TTTATCACCG CTTTCGGTCC TAACGGGCGG TTTTTATACA GCGCCTTCAG CCGTTTTTTC
CGTCAGGAGC TGGTAGATTT GCTGGCACGT TATGGGGTGG AAACCAAGGC CGAAAGGGGC
GGGCGGCTTT TCCCCGTTTC GGATAAGGCT CATGATGTGG TGGCGGCATT AACTAAATAT
GCTTCAGGCG CGGCCTTGGC AAGCGGGCAA AAGGTCAGCC AGATACTGGT GAGCGAGGGG
AGGGTAGTGG GGGTCAAAAC TGAAAAGGAG ACCTTCAGGG CGGATGCGGC GGTGATTGCC
ACCGGGGGTG CGTCCTATCC CGGTACCGGC TCTTCGGGAG ACGGTTTCCG TTTGGCGGAA
GCGCTGGGGC ATACTATTGT GAAGCTTCGT CCGGCTCTGG TGCCTCTGGT GGTGAAAGAG
ATAGATTTGG CAAAGAGCAT GCAGGGGGTG GCACTGAAAA ATATCCGCCT GACAGCCTAC
CGCTGTGAAG CGGATAAAAT ACCTGCGGAT TTGACCCTGC AGGACTGGGG GCGGGGTATT
GCTGGCAAAA AATCGCCCAA AGTGGTGATT GAAAGCCGCA TGGGTGAGCT GATGATTACC
CACTTCGGGC TGGGCGGGCC TTTGACCATG CTGATGGGGT TGCCGGTTGC CGAGGCACTG
GATCAAGGGG CGGTGAGTGT GGCCATAGAT TTAAAACCGG CACTGTCGCT GGATAAACTG
CGTCTTCGCC TCCAGCGGGA CTTTGATACT TTCGGCAAAC GCAGTTTTCA AAACCTGCTC
TCAGAGCTTT TGCCCCAGAA GATGATAAGG CCGTTTGTAG ACCTGACTGG CATAGACCCG
TTCAAATGCG GCGGCCAGAT AACGGCGGCT GAACGCGAAG TTATCTTGGC AAATCTGAAG
TGCCTGCGGT TCAATATTAC TTCCACTTTG CCTTTAAGTG CGGCGGTGGT GACTGCCGGC
GGGGTAGACC TAAAGGAGAT AAACCCGCGG ACTATGGAGT CTAAACTGAT AAGTGGGCTT
TATTTCTGCG GGGAGGTTAT GGATATAGAT GCGGATACCG GCGGTTATAA CCTTCAGGCG
GCTTTTTCCA CCGGCTATCT GGCAGGTGAA TCAGCGGCGG GGGCTTGA
|
|---|
| Protein sequence | MTVKEIVVIG AGAGGLMAAG RAAECGGKVI LLEKTEQPGK KMLISGQGRC NISNSRDIAE
FITAFGPNGR FLYSAFSRFF RQELVDLLAR YGVETKAERG GRLFPVSDKA HDVVAALTKY
ASGAALASGQ KVSQILVSEG RVVGVKTEKE TFRADAAVIA TGGASYPGTG SSGDGFRLAE
ALGHTIVKLR PALVPLVVKE IDLAKSMQGV ALKNIRLTAY RCEADKIPAD LTLQDWGRGI
AGKKSPKVVI ESRMGELMIT HFGLGGPLTM LMGLPVAEAL DQGAVSVAID LKPALSLDKL
RLRLQRDFDT FGKRSFQNLL SELLPQKMIR PFVDLTGIDP FKCGGQITAA EREVILANLK
CLRFNITSTL PLSAAVVTAG GVDLKEINPR TMESKLISGL YFCGEVMDID ADTGGYNLQA
AFSTGYLAGE SAAGA
|
|---|
| |