Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_175 |
Symbol | mpxC2 |
ID | 8657128 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | - |
Start bp | 173038 |
End bp | 174249 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | molybdopterin oxidoreductase, formate dehydrogenase membrane subunit |
Protein accession | YP_003329674 |
Protein GI | 270307616 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.100817 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTCAATG CCATCAAGGG CTGGGTAAAC AAGCTCGAAC AGACCGGCAA CCCCAACGTG CCTTTATTCG GCAAATGGGG ACTCCTCCAG ATTATCCTTG GTCTGGGCGC CTTAACCGTG GCCGGGTTGA AACTGGCTTA TGGTCTGGGT CCCATCACCA ACCTTTCAGA TAACTGGCCA TGGGGTCTTT GGGTTGCCTT TGACGTAGGC GCATATATCG CCTCGGCTGC CGGTGGTTTC ACCATGGCTG CCATCGTATA CATATTCGGT TTTGAGAAAT TCCGCCCCCT GGTACGGCCG GCTATTCTCA TCGGTGCGTT GTGTTACACC ATCGGCGCTA TCGGCATCAT GATTGACCTT GCCCGCTCCA TACGGATTAT TCATCCTATC TGGATGTGGA ATCATGAGTC TATCATGTTC GAAGTAGGCT GGTGCGTTAT GATGTACCTG ACCGTACTCT ATCTCGAATT CTCTAATAAT ATTTTCGAAC GTATTGGCTG GAAGAAGCTG GGTAACCTGC AGCATGCCTT TATCATTCCG CTGGTTATCT TCGGCATTAT GCTCTCTTTC CTCCACCAGT CTTCACTGGG TGCCCTTTTC CTGATTAACC CGGCTCAGCA GCCCCTCTGG CACGGCCCGC TGATGGGTCA CCTGTTCCTG GTATCCGCCA TGGCTCTGGG TTTGTCAGTT CTCACTTACT TCTCCATTAT ACTGTCACGC TCATGGAAGA TGACCCTGCG TATGGATATT CTTTCCAAAC TGGGGCTGGT TATCGGCTGG ATACTGCTGG TATATCTGGC AGCCCGCGGC GTTGATTACG CTATGACCGG AAACCTGGCC ACCGGCCTTA ATGGTGACTG GTATACCGTA CTCTGGGTAA CTGAAGTAGG TATCGGCATG TTGCTGCCCA TGATAATGCT CTTCATAAAG AAGGTCCGCA CTTCACGCAC CGGCCTTCTC TGGGCAACCG GTTTGATAAT TATGGGTGTG GTCTTAAACC GCATAAATAC CCTGGTTATC TCTCAGGCTC CCAACCGCGA AGGCAGTTAT TTCCCGCACA TACTGGAATT CGTCTTCACC TTCGGTCTTA TTGCCGGGGC TATGTATGTA TTCCGCCTGT GTGCCAAATA CCTGCCGCTT TATTCTGACC ACATGAAGGG GCTTACCCCT GAACAGGTCA AGAAAGCACC TGAGGTTATA CCGGCAAACT AA
|
Protein sequence | MFNAIKGWVN KLEQTGNPNV PLFGKWGLLQ IILGLGALTV AGLKLAYGLG PITNLSDNWP WGLWVAFDVG AYIASAAGGF TMAAIVYIFG FEKFRPLVRP AILIGALCYT IGAIGIMIDL ARSIRIIHPI WMWNHESIMF EVGWCVMMYL TVLYLEFSNN IFERIGWKKL GNLQHAFIIP LVIFGIMLSF LHQSSLGALF LINPAQQPLW HGPLMGHLFL VSAMALGLSV LTYFSIILSR SWKMTLRMDI LSKLGLVIGW ILLVYLAARG VDYAMTGNLA TGLNGDWYTV LWVTEVGIGM LLPMIMLFIK KVRTSRTGLL WATGLIIMGV VLNRINTLVI SQAPNREGSY FPHILEFVFT FGLIAGAMYV FRLCAKYLPL YSDHMKGLTP EQVKKAPEVI PAN
|
| |