Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_172 |
Symbol | |
ID | 8657125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | + |
Start bp | 169213 |
End bp | 170898 |
Gene Length | 1686 bp |
Protein Length | 561 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003329671 |
Protein GI | 270307613 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000114775 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTTTCG AATCTTTCAA TTTTGCTCCG GCTGTTATGG CTGGGGTCAG GGCTTGCGGT TATCAAGAGC CCACCCCCAT TCAGGCCCAG GCTATTCCCC CCATTATGGA AGGGCACGAT GTTATTGGTC TGGCTCAAAC AGGCACAGGT AAAACCGCTG CTTATGCTCT GCCCATTATT CAGAAAATGC TTTCCACTCC CAGGGGACGG GTACGCACCC TTGTTATTGC ACCGACCCGG GAACTGGCTT GCCAGATTTC CGATAGTTTC CGTTCACTTG GTCAGCGCGC CCGTATTCGG GAGTGCTCCA TTTACGGCGG TGTAAATATG GACCAGCAAA TCCGCCGCTT AAGGAGCGGG GTGGATGTAG TGGTTGCTTG CCCCGGCAGG CTTCTTGACC ATATATGGCG GGGTACTATT GATGTTTGCG GGGTTGAAAC CCTGATTATA GACGAAGCTG ACCGCATGTT TGATATGGGT TTCCAGCCGG ATATCCAGAG CATTTTAAAA TGCCTGGTTC AGCCTCATCA AACTCTTTTA TTTTCGGCAA CTATGCCGCC GGAGGTCCGT AAGCTTACTC AGGAAAGTCA AACCAATCCG GTGACTATAC AGGTTGGGAC TCAGGCCCCG GCAAGCAGTG TCAGCCACAG TGTTTATCCG GTGAAAAGCC ACCAGAAAAC CCCTTTGCTG ATTGAAATAC TGAAAACAGT AGAAACTAAG TCTGTCCTGA TATTTGCCCG AACCAAGTAC GGGGCAGAAA ATCTGGCTGA CGAAATATCT AAAGCCGGTT TTACTACCGC TTCGCTCCAG GGTAATCTTT CCCAGAACCG CCGTCATGCC GTTATGGAAG GATTCCGCCG CAGAAATTTC AAAATTCTGG TAGCTACTGA TATTGCCGCC AGAGGCTTGG ATATTGACCA TATTTCCCAT GTGATAAACT TCGATATGCC GGATACTCCT GAAGATTATA CTCACCGTAT CGGGCGGACA GGGCGTTTTG ACCGCACCGG TCAGGCCCTC AGTTTGGTAA CCGGACGTGA TGGCGATATG GTAAGAGATA TCCAAAGGCT CTTAAGCAGC CCTATTCAGC GTCTTCGGGT TGACGGGTTT GATTATGCGA CTACCCGCAA TGACGGACAA CACCAGTCAC AACGCAGGGA TTTTGCCCCC CGCCGCGGTT ATTCAAGTGG CGGTTACAAT CGCCCTGAAA TGTCTGTAAA TGAGGCTTTG CAAACGGATA CCCCGGCTGA GATGCCGCTA AGCCCTGCCA GACCCTATAA TGCAGGTTTC AGACCGGGCC GCCCCTCAAA TTCTGCTCCC CGTTTCCGCA GGGAGGGTAA CTTTGCACCC CGTATACAGA GACAGACTTC TTTTGAGGAT AGCCCTGCGC CGTCACCCAG ACCTGAAGCC CGGTTTAATG ACCGTCCCTC TTATAGAAAA GAGAATAGCT TTCCTGTTTC CGAACAAGTG CGTCCTGCTT TCAAAAAGGA AACCGGGTTT ACTCCCCGTG AGCATAACCC GGCTGATTTT GAAAATCACG AACAGCCTTC AGGCAGGCGT CCTGCCCGGT TTAACGGAAA GGCTTCTTTT GCAGATCGCC CTGCCCGTCC GGGGAATAAA GTGGGGAAAC CTCCCTTCTT TAAACGGTCA AAGAAACCCG TTTCAGAGAA TAACGAAACT TACTAG
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Protein sequence | MSFESFNFAP AVMAGVRACG YQEPTPIQAQ AIPPIMEGHD VIGLAQTGTG KTAAYALPII QKMLSTPRGR VRTLVIAPTR ELACQISDSF RSLGQRARIR ECSIYGGVNM DQQIRRLRSG VDVVVACPGR LLDHIWRGTI DVCGVETLII DEADRMFDMG FQPDIQSILK CLVQPHQTLL FSATMPPEVR KLTQESQTNP VTIQVGTQAP ASSVSHSVYP VKSHQKTPLL IEILKTVETK SVLIFARTKY GAENLADEIS KAGFTTASLQ GNLSQNRRHA VMEGFRRRNF KILVATDIAA RGLDIDHISH VINFDMPDTP EDYTHRIGRT GRFDRTGQAL SLVTGRDGDM VRDIQRLLSS PIQRLRVDGF DYATTRNDGQ HQSQRRDFAP RRGYSSGGYN RPEMSVNEAL QTDTPAEMPL SPARPYNAGF RPGRPSNSAP RFRREGNFAP RIQRQTSFED SPAPSPRPEA RFNDRPSYRK ENSFPVSEQV RPAFKKETGF TPREHNPADF ENHEQPSGRR PARFNGKASF ADRPARPGNK VGKPPFFKRS KKPVSENNET Y
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