Gene DhcVS_172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhcVS_172 
Symbol 
ID8657125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides sp. VS 
KingdomBacteria 
Replicon accessionNC_013552 
Strand
Start bp169213 
End bp170898 
Gene Length1686 bp 
Protein Length561 aa 
Translation table11 
GC content51% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003329671 
Protein GI270307613 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000114775 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTTCG AATCTTTCAA TTTTGCTCCG GCTGTTATGG CTGGGGTCAG GGCTTGCGGT 
TATCAAGAGC CCACCCCCAT TCAGGCCCAG GCTATTCCCC CCATTATGGA AGGGCACGAT
GTTATTGGTC TGGCTCAAAC AGGCACAGGT AAAACCGCTG CTTATGCTCT GCCCATTATT
CAGAAAATGC TTTCCACTCC CAGGGGACGG GTACGCACCC TTGTTATTGC ACCGACCCGG
GAACTGGCTT GCCAGATTTC CGATAGTTTC CGTTCACTTG GTCAGCGCGC CCGTATTCGG
GAGTGCTCCA TTTACGGCGG TGTAAATATG GACCAGCAAA TCCGCCGCTT AAGGAGCGGG
GTGGATGTAG TGGTTGCTTG CCCCGGCAGG CTTCTTGACC ATATATGGCG GGGTACTATT
GATGTTTGCG GGGTTGAAAC CCTGATTATA GACGAAGCTG ACCGCATGTT TGATATGGGT
TTCCAGCCGG ATATCCAGAG CATTTTAAAA TGCCTGGTTC AGCCTCATCA AACTCTTTTA
TTTTCGGCAA CTATGCCGCC GGAGGTCCGT AAGCTTACTC AGGAAAGTCA AACCAATCCG
GTGACTATAC AGGTTGGGAC TCAGGCCCCG GCAAGCAGTG TCAGCCACAG TGTTTATCCG
GTGAAAAGCC ACCAGAAAAC CCCTTTGCTG ATTGAAATAC TGAAAACAGT AGAAACTAAG
TCTGTCCTGA TATTTGCCCG AACCAAGTAC GGGGCAGAAA ATCTGGCTGA CGAAATATCT
AAAGCCGGTT TTACTACCGC TTCGCTCCAG GGTAATCTTT CCCAGAACCG CCGTCATGCC
GTTATGGAAG GATTCCGCCG CAGAAATTTC AAAATTCTGG TAGCTACTGA TATTGCCGCC
AGAGGCTTGG ATATTGACCA TATTTCCCAT GTGATAAACT TCGATATGCC GGATACTCCT
GAAGATTATA CTCACCGTAT CGGGCGGACA GGGCGTTTTG ACCGCACCGG TCAGGCCCTC
AGTTTGGTAA CCGGACGTGA TGGCGATATG GTAAGAGATA TCCAAAGGCT CTTAAGCAGC
CCTATTCAGC GTCTTCGGGT TGACGGGTTT GATTATGCGA CTACCCGCAA TGACGGACAA
CACCAGTCAC AACGCAGGGA TTTTGCCCCC CGCCGCGGTT ATTCAAGTGG CGGTTACAAT
CGCCCTGAAA TGTCTGTAAA TGAGGCTTTG CAAACGGATA CCCCGGCTGA GATGCCGCTA
AGCCCTGCCA GACCCTATAA TGCAGGTTTC AGACCGGGCC GCCCCTCAAA TTCTGCTCCC
CGTTTCCGCA GGGAGGGTAA CTTTGCACCC CGTATACAGA GACAGACTTC TTTTGAGGAT
AGCCCTGCGC CGTCACCCAG ACCTGAAGCC CGGTTTAATG ACCGTCCCTC TTATAGAAAA
GAGAATAGCT TTCCTGTTTC CGAACAAGTG CGTCCTGCTT TCAAAAAGGA AACCGGGTTT
ACTCCCCGTG AGCATAACCC GGCTGATTTT GAAAATCACG AACAGCCTTC AGGCAGGCGT
CCTGCCCGGT TTAACGGAAA GGCTTCTTTT GCAGATCGCC CTGCCCGTCC GGGGAATAAA
GTGGGGAAAC CTCCCTTCTT TAAACGGTCA AAGAAACCCG TTTCAGAGAA TAACGAAACT
TACTAG
 
Protein sequence
MSFESFNFAP AVMAGVRACG YQEPTPIQAQ AIPPIMEGHD VIGLAQTGTG KTAAYALPII 
QKMLSTPRGR VRTLVIAPTR ELACQISDSF RSLGQRARIR ECSIYGGVNM DQQIRRLRSG
VDVVVACPGR LLDHIWRGTI DVCGVETLII DEADRMFDMG FQPDIQSILK CLVQPHQTLL
FSATMPPEVR KLTQESQTNP VTIQVGTQAP ASSVSHSVYP VKSHQKTPLL IEILKTVETK
SVLIFARTKY GAENLADEIS KAGFTTASLQ GNLSQNRRHA VMEGFRRRNF KILVATDIAA
RGLDIDHISH VINFDMPDTP EDYTHRIGRT GRFDRTGQAL SLVTGRDGDM VRDIQRLLSS
PIQRLRVDGF DYATTRNDGQ HQSQRRDFAP RRGYSSGGYN RPEMSVNEAL QTDTPAEMPL
SPARPYNAGF RPGRPSNSAP RFRREGNFAP RIQRQTSFED SPAPSPRPEA RFNDRPSYRK
ENSFPVSEQV RPAFKKETGF TPREHNPADF ENHEQPSGRR PARFNGKASF ADRPARPGNK
VGKPPFFKRS KKPVSENNET Y