| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_167 |
|---|
| Symbol | rdhC |
|---|
| ID | 8657121 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. VS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013552 |
|---|
| Strand | - |
|---|
| Start bp | 164461 |
|---|
| End bp | 166230 |
|---|
| Gene Length | 1770 bp |
|---|
| Protein Length | 589 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | |
|---|
| Product | sensor histidine kinase |
|---|
| Protein accession | YP_003329667 |
|---|
| Protein GI | 270307609 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACCG AAAATAACAA GGTTGGGGTA GTGACTTGCG TAAGCATGAG CAACTTTGTT
AAAAACTGGG CTCTGCACAG GAATCTGGAC GTCCGCATTT ACCCCATAAC CAACTCCTGC
TTCTACAGCG TAAAAATAGA GATGCTATCC TATTATATTG AACGGGCAAT CCTGGAAAAC
GGATACTGCA TTTTAAACTA CGGCATGTGC AATGAATCTA TCACCGAGCT TAAAAACCAC
TATGCCGAAA GATTATCTGT GGTAGAGCTG GATAACTGTT ACGAAGCAGC CATAGGCACC
GCCATCTACC ATGAGCGTGT AGAACAGGGA CATATTTTCC GCAATCCCAC CACCATGTCC
TGCTGGCACA GTATGCCCGC ACTGGAAGTT ATGCAACCGG TGAAAGCAGG CATCTACCCT
GCCCCGATAA CATTTATTCT GGAAAACGGC GAGGAAGAAA AAGCTGCCAG TTATGTAAAC
AACCTTAAGA ACAACACTGC ACTCGAGTAT TCGGTTGAGG TACTGCACCC CCAACCCCAC
TTCTTGGAAG ATAAACTGGA CCAGGCCTAT GCCAAAATAC AGCTTGCCAG TGAAGAAGAA
GACGAAACCT CCCGCCAGCT GATTTTCCCG TTCTCTTTCC ACAACTCAAA TGAATACCTG
TATATTCTGG ACAAACATGA CAAAATAATA TTCAGCCCCT ATGTTGCTCT GGCAACTCCC
AACCAGATAT GCCAAAGGCT GCTGCAGCTT ATTGTAAACC GCAAAGCAGA TATCAATTTT
CAGGTAAAAG ATTTTGATTC CCTGCTAAAA CACCGAGGGT TGTATCTGGA TAAATGCAAA
CGCTTTGCTA ACCGTTCGTC CTTGACCACC GAATATGAAA TTATCCAGAA TAATAAATCC
ACCTGGATAA AAGAAACCCT GTGGGTGTCT TATGACGATA ATTGCTCTAT ATCCAATATC
TGCGGGCGGA TGGAAGATAT CACCGAGGTG AAAATTTCTG AAAAATCCAT AGCTGAAAGC
TACACTAAAG AATGCCTGCT GAGGCAGGCC CTGCAGGACG AAACCAAGAA AAGGCAGGCC
CACCTTAAGG CTCTGGTACA TGAAATAAGA ACCCCCCTCA CCCCTCTGCT TGCTGCCAGT
GACGCATTGG TAAATGTCTC TGAGAAAGGC ACTGAACTTT ATAATCTGGC CAGCAGTATC
CGCGAAGGGG CAGAAACCTT GAACAGCCGA ATTCACGATT TGATTGAACT TGAGCGCGGT
AAAATAGGCA TGCTGAAACT GAAAATGGCT AACTACTCCA TTGAGGATAT CATGGACGAG
TTGCAGCTGC GTTATATGCC TATTTTTCTA AAACAGCATA AAAGCCTGGC CTTCGGTAAT
GAAACACCTA ACTCCGAAAT ATACTGTGAC AAAGAGCGTT TGCTGCAGAT ACTGACCAAC
CTGATAGACA ACGCCCTGAA ATATACCAAA CAGGATGACA GTGTATTGGT TTCCGCCTGG
ATAGAAAATG GATTTCTGCG CTTTAGCGTA AGCGACAGCG GGGCGGGTGT ACCTGCCTGC
CTGATTCCTG ACCTATTTAC AGAATACGGC AAACTCAGCG GCGGGCATAA CCTCAGCGGA
CTAGGATTAG GCCTGCCTAT TGCCAAACTT TATGTTGAGG CCCATGGAGG CAGTATTATC
TATAATCCGG CAAAACCCAA AGGCAGTGAA TTCTCTTTTA CCATACCGGT TAAAGGTCTG
TCTCAAAAAG AAAACCATGC TTCAGGATAG
|
|---|
| Protein sequence | MKTENNKVGV VTCVSMSNFV KNWALHRNLD VRIYPITNSC FYSVKIEMLS YYIERAILEN
GYCILNYGMC NESITELKNH YAERLSVVEL DNCYEAAIGT AIYHERVEQG HIFRNPTTMS
CWHSMPALEV MQPVKAGIYP APITFILENG EEEKAASYVN NLKNNTALEY SVEVLHPQPH
FLEDKLDQAY AKIQLASEEE DETSRQLIFP FSFHNSNEYL YILDKHDKII FSPYVALATP
NQICQRLLQL IVNRKADINF QVKDFDSLLK HRGLYLDKCK RFANRSSLTT EYEIIQNNKS
TWIKETLWVS YDDNCSISNI CGRMEDITEV KISEKSIAES YTKECLLRQA LQDETKKRQA
HLKALVHEIR TPLTPLLAAS DALVNVSEKG TELYNLASSI REGAETLNSR IHDLIELERG
KIGMLKLKMA NYSIEDIMDE LQLRYMPIFL KQHKSLAFGN ETPNSEIYCD KERLLQILTN
LIDNALKYTK QDDSVLVSAW IENGFLRFSV SDSGAGVPAC LIPDLFTEYG KLSGGHNLSG
LGLGLPIAKL YVEAHGGSII YNPAKPKGSE FSFTIPVKGL SQKENHASG
|
|---|
| |