Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_154 |
Symbol | hymB1 |
ID | 8657108 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | + |
Start bp | 153586 |
End bp | 154839 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | [Fe] hydrogenase, HymB subunit |
Protein accession | YP_003329655 |
Protein GI | 270307597 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGACG TGAAGATTAT TACCCGTCAT CTGAACACTG CCAATTCAGC TGATATTGAT GTATATCTGG CTGACGGCGG TTACCAGGCC CTTAAGAAAG CTTTGTCTAT GACCCCGGAG GAAGTGATTG CCGAGGTCAA ACGCTCAAAG CTGGTGGGCA GGGGGGGAGC GGCCTTTCCC ACCGGGCTCA AATGGGAGCT TACCCGCAAG GAAAAGGCCA ACCCGAAATA TATTGTCTGT AATGCCAGCG AGGGCGAACC GGGCACTTTT AAGGACCGGT TGATACTTAA AAATGACCCC CATATGGTAC TGGAAGGTTT TATTATTGCC GCTTATGCGG TGGGCACTTC CCAGGGCTTT ATTCACGCCC GTGAGGTTTA TACCGAAGAG ATAGAGCTTT TCCAGAAAGC CATAGACCAG GCAACCGAAC GCGGTTTTCT GGGGCAGAAT ATCATGGGGA GTAATTTCTC GCTGGATATT CAGTTTTACA AGAGTGCCGG TGCTTATATC TGCGGTGAGG AAACAGCCCT TTTTGAGTCC CTTGAAGGGC ACAGAGGTAT TCCCGCCGCC CGCCCGCCGT ATCCGGTACA GGTGGGGCTT ATGGATAAAC CCACTACGGT TAACAACGTA GAAACTCTCT GCAATGTTCC TGCCATTATA AATAACGGGG CGGACTGGTT CGCTTCAATA GGCCATCCGG ACTATCCCGG TACCAAGCTT TTCTGCCTTT CCGGCAACGT GAAAGAGCCG GGTGTTTTTG AAATGCCGCT GGGAACCAAC CTGAAGGACT TGCTTGAGGC CGGGGGGGGC GTAGACGGCA AGTTCAAGGC GGTTTTACCG GGCGGCATAT CTTCCAGCCT GCTGACCGAA ACTGATATCA GTCTGGATTT CAAGACGCTG GCCAAGGCCG GTACTATGCT TGGGTCAGGC GCGGTTATTG TTATAAACTC CGACACCAGT ATGGTCAATG TAGCCTCCAA CGTAGCCCAC TTCTTTGACG AAGAGGGTTG CGGCAAGTGC TCTATCTGCC GCGAAGGTAC TCGCCGGGCG GCTGAAATCC TGAGCCGCTT TTCCCGCGGG CAGGGTAACC GCAATGAACT GGAGTGGCTG CTGGAACTGC ATGAGGTAAT GAAAGATACT GCTTCCTGCG GTCTGGGGCA GGTGGCCCTG AATGTGGCTG CCAGTGCTAT CCGCAACTTC AAGGGTGAAT TCTTGGCGCA GGTGCGTAAG GAGGAAGGCG TATGGTTACG CTAA
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Protein sequence | MKDVKIITRH LNTANSADID VYLADGGYQA LKKALSMTPE EVIAEVKRSK LVGRGGAAFP TGLKWELTRK EKANPKYIVC NASEGEPGTF KDRLILKNDP HMVLEGFIIA AYAVGTSQGF IHAREVYTEE IELFQKAIDQ ATERGFLGQN IMGSNFSLDI QFYKSAGAYI CGEETALFES LEGHRGIPAA RPPYPVQVGL MDKPTTVNNV ETLCNVPAII NNGADWFASI GHPDYPGTKL FCLSGNVKEP GVFEMPLGTN LKDLLEAGGG VDGKFKAVLP GGISSSLLTE TDISLDFKTL AKAGTMLGSG AVIVINSDTS MVNVASNVAH FFDEEGCGKC SICREGTRRA AEILSRFSRG QGNRNELEWL LELHEVMKDT ASCGLGQVAL NVAASAIRNF KGEFLAQVRK EEGVWLR
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