Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_1480 |
Symbol | |
ID | 8658405 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | - |
Start bp | 1377572 |
End bp | 1378771 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | |
Product | membrane bound regulatory protein, VcrC-like protein |
Protein accession | YP_003330905 |
Protein GI | 270308847 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAATATT TCAATAGGGT TATTTCAAAT CGCAGCAGGA TATTTACATT GCTGGCTTTG TTAAGCTTGG GGCTTGCCGC TTTGTATGGT TTTACCCACC AGGATTTAGG CTACAAGGAA TACATTCCTC AGGTTGTGTC TGCAGATTCC GAATATACCG AATTGATGGC TACCAGTCAG GGTGTGCTTT ACGGCATACT GGACGATGAA GGCCAGATGG AAAGCTACGT TACTATTTCA CAGGGACAAG GTTACGGCGG TCCTCTGCTG GTTGCCCTTG ACTGGAGTCT TGACGGTATT ATCCAGCAGA TATCAGTTCC CATTCAGCAC GAAGACCTTC CCTGGTGGCG GGTTCTTGAA GCCAGACATT TTTTTGAACA ATATATAGGC CGCGGTTACG AAGAACCTAT CCAGATACAC GAAGATATAG ATGCTGTTTC AGGGTCTACT GTTTCTTCAA ACGGGGTAGC CATGGCTGTC AAGGCCGGCC GGCTTCTGAT AGTAAAAGAG CTGGGTTCGG ACTATAAAGA CCCCCTGCCC GGTATAAAAT TCGGTTTACC GGAGTTGCTG GTATGTCTGG GGCTGGTCTT TGTTTTCTGG GTGCGCACTT TCAGGCCGTT TAAAAACCCC AAATATGCCC GTTATCTGGC TCTTGCCTAC AGCTTCTTTA TAGTGGGTAT CTGGCTTTCA GTACCCCTTA GCCTGAACAA TATCTCCAGT TTTCTGGTAG GTTATGCCCC CAGCCTTGAG CAGTTCATAA TCTTTTATAT TGTAGTTTGG GGGATACTGG GGCTGGCTAT TCTCTTCGGC AAAAATTACT ACTGTTACTG GATGTGCCCT TTCTCTGCTG TTCAGGAAGG TCTTCATTTT ATCGGAGAAG GTGTCTCACC TTCCGCCAAT GCCCAGAAAC GTTTTAAGTG GGTTCGCTAC TCGCTGCTTT GGTTGGCATT GATGCTGGTG TTTATATTCA GAGCGCCAAA TATATCAGGT TTTGAGCCGT GGAATTTACT TTTCAGCCTG AAAGGGGACT TCCAGGAATG GATACTCATG ATAGCCACAT TGGTAGGTGC TCTGCTGTTC TACAATTTCT GGTGCAATTA TCTTTGCCCT GTAGGGGCTT CACTGGATAT AATAATCAAG GCGCGTAAAT GGGTGGGGAA TAAATGGAAA AGCCTATTAA AGAAAAAAGC AAGGCGATAG
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Protein sequence | MKYFNRVISN RSRIFTLLAL LSLGLAALYG FTHQDLGYKE YIPQVVSADS EYTELMATSQ GVLYGILDDE GQMESYVTIS QGQGYGGPLL VALDWSLDGI IQQISVPIQH EDLPWWRVLE ARHFFEQYIG RGYEEPIQIH EDIDAVSGST VSSNGVAMAV KAGRLLIVKE LGSDYKDPLP GIKFGLPELL VCLGLVFVFW VRTFRPFKNP KYARYLALAY SFFIVGIWLS VPLSLNNISS FLVGYAPSLE QFIIFYIVVW GILGLAILFG KNYYCYWMCP FSAVQEGLHF IGEGVSPSAN AQKRFKWVRY SLLWLALMLV FIFRAPNISG FEPWNLLFSL KGDFQEWILM IATLVGALLF YNFWCNYLCP VGASLDIIIK ARKWVGNKWK SLLKKKARR
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