| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_1456 |
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| Symbol | |
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| ID | 8658381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. VS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013552 |
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| Strand | - |
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| Start bp | 1355936 |
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| End bp | 1357303 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | |
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| Product | mechanosensitive ion channel protein |
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| Protein accession | YP_003330882 |
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| Protein GI | 270308824 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000389307 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGATTG AATTTACGTT GGATAGTCTG GTTATGTTGG CTATTGTAGC GGCTGTGGCT
CTGGCGTTAT TCCTGCTGGT GAATAAGTTA TTTTCTAAAT TTATCCGTAA AGATGAAGAA
AAACAGCTAA GCCTGCTTAG AAATGAGCTT AAATCAATCC GCTGGCCGGT TTTGCTGATT
ATCTGGTGTA TTGCTTTATA TATTATAGCT GAAAATCTGA CTATTGAAGT CGAACTTGGC
AAACAGATTT CCAAAGCTTT GGAATTACTG ATGGTGGCCC TGACCCTGTG GATTGGGGCA
GGACTTATAG AGGGGTTGCT TAGCTGGCTT AAGACCGAAA TACCCGGCAA GGCCAAGTCA
AAGGTAAACG ACCATATTAT AGACAGCCTT CGCTTCATCG TGCCATTTTT GGCACTCCTG
ATGCTGGTTG TTGCTGGTAT AAACGTATAC GGAGTGGCTG CAGACGGGTT GACTGTTTGG
CTGGGTACTC ACGGAGTTAA GCTGTTACTT ATCATAGGTC TTATTATTGC CGGTGTGTAT
GCCGTCAGCC GTGGTGTGCC GGCGCTTATC CGCGGGATAA TGTTTGGAGG GATTGCCAAA
CCTAAAGAAG AGGCTAAAAA GCGGGCTGAT ACCCTTATCG GGGTGGCTGT TTCCACTGCC
GAAGTTGTAG TGGTGGCCAT GGGGGCTTTT GTGGCCCTGT CCGAGGTGGG GCTGGATATC
GGGCCGATAC TGGCCGGGGT TGGCGTTCTG GGTGTAGCTA TCGGTTTCGG TGCCCAGAGT
TTGGTAAAAG ACTACCTTTC AGGTTTGTTC ATAATACTGG AAAACCAGTA TTCAGTGGGA
GATGTCATAA AGGTAATGGA TGTGGTGGGT GAGGTGGAAT TTATAGATTT ACGCCGTACT
ATCGTGCGTG ACCTGGATGG GGTAGTTCAC GTGGTTTCCA ACGGCGAAAT ACGGATAACC
AGCAACTACA CCAAATACCT TTCGCGTGTT AATTTCGATA TCAGTATCGG CTATCAGGAA
GATATAAACC ACGCTATAGA TGTTATAAAC AAGGTATGTG CCGAATTCAC CAGTGAGCCC
GAATGGAGTA AATCCGTAGT TAAAAATTCA CTCGGGGTAC TCCGTGTAAA TAAACTGGGT
GATTCCGGGG TAGATATAAA AGTTTTGGGT GATGTCAAAC CGGGTACTCA GTGGGCTATC
AAAGGCGAGC TCCGCAAGCG GATAAAACTT GCTTTTGACC GTGAGCATAT TGAAATACCC
TGGCCGCATA CCAAGGTATT TTTTGGCAAT GCTTTGCCGT CTACCAAAGT TCAAATTCCC
AAGGTGCCGA ATGAAGAACA CCCGGATATT GATACCGAAT CAGAGTAG
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| Protein sequence | MLIEFTLDSL VMLAIVAAVA LALFLLVNKL FSKFIRKDEE KQLSLLRNEL KSIRWPVLLI
IWCIALYIIA ENLTIEVELG KQISKALELL MVALTLWIGA GLIEGLLSWL KTEIPGKAKS
KVNDHIIDSL RFIVPFLALL MLVVAGINVY GVAADGLTVW LGTHGVKLLL IIGLIIAGVY
AVSRGVPALI RGIMFGGIAK PKEEAKKRAD TLIGVAVSTA EVVVVAMGAF VALSEVGLDI
GPILAGVGVL GVAIGFGAQS LVKDYLSGLF IILENQYSVG DVIKVMDVVG EVEFIDLRRT
IVRDLDGVVH VVSNGEIRIT SNYTKYLSRV NFDISIGYQE DINHAIDVIN KVCAEFTSEP
EWSKSVVKNS LGVLRVNKLG DSGVDIKVLG DVKPGTQWAI KGELRKRIKL AFDREHIEIP
WPHTKVFFGN ALPSTKVQIP KVPNEEHPDI DTESE
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