Gene DhcVS_1453 details

Gene Information

• Locus tag: DhcVS_1453
• Symbol: hycC
• ID: 8658378
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. VS
• Kingdom: Bacteria
• Replicon accession: NC_013552
• Strand: -
• Start bp: 1352839
• End bp: 1354773
• Gene Length: 1935 bp
• Protein Length: 644 aa
• Translation table: 11
• GC content: 48%
• Product: hydrogenase subunit, HycC-like protein
• Protein accession: YP_003330879
• Protein GI: 270308821

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAGCGG GTTTATTGCT TGGCGGTGGG GGGTTACTTC TTGCTGCTGC CCTGACGGGC 
ATAGTGTTAA ATCACGGCAG GAAAAAGGTT TGGCAGGCGG TGCTGTGGCT GATTATAACG 
GCTGCGATAT GCCTGATTTG CGGGTCTTTA CCGGTATTTT TCGGCGGTCC GCTGGATATT 
TCTCTCTGGG GTATCGCACC CGGGTTGGAC ATAACCTTTC ATTTTGACCA TCTGGCATCG 
TTTTTTGTCA TAATAATCAG CCTTATTTCG CTTTGTGTAG CAATATACTC TCTGGGATAC 
AACCATCACC TGTCTTCCAA CGAACGTGCC AACCTGCTTT CAGCCTTTAT GAGTGTTTTC 
ATACTTTCCA TGGTTGGGGT GGTGGCCTCA GCCAATACCT TTAGTCTGTT ATTCTTCTGG 
GAGATAATGG CGCTTAGCTC CTTTTTACTG ATGATGAATG ATTATCAGGG GGTATTTACC 
CAGCGTGCAG GCGTCTATTA TTTTGTGCTT ACCCAGCTAA GCACTGTTTT CCTGATGCTG 
ATGACTGTGG TTATGTATAT CCAAAACGGC AGTTTTGAAC TTAGCCTTGA CGGTGCGCCG 
TCCGGTATTC AAAGCTTTGT TTTTATACTG GCATTTCTGA CCTTTGGGAT AAAGGCCGGT 
ATCATACCCC TTCACAAGTG GTTGCCGTAT GCCCATTCTG CCAGTCCTTC CAACGTCTCC 
GCCCTTATGT CCGGAGTAAT GCTCAAAGTG GCTGTTTATG GTCTGGTACG TTTCCTTACG 
GATATTCTCA GCCCGGAAAT ATGGTGGGGG GTATCAATAC TTCTGCTGGG GATGATAAGT 
GCCTTGCTCG GCATTATCTA TGCATTTAAA GAACATGACC TTAAAATGCT GCTGGCTTTT 
TGCAGTATAG AAAATATCGG CATTATTATG ATGGGTATTG GCCTGTATGT TATTTTCGGT 
TGCTACGGGC TGGATACTAT GGCTATGCTG GCACTCGGTG CGGCCTTATT TCACAGTCTG 
AACCATGCCA TTTTTAAAAG TCTGCTGTTT ATGACTGCTG GGTCGGTGGT GATTGCGGTA 
GGTGACCGCA ATATTGAAAA AATGGGCGGG CTGGTGAAAC TTATGCCCTA TACCTCGGTT 
ATCTTTCTGG TTGGGGCGGT TTCCATATCC GCTCTGCCTC CCTTCAATGG CTTTATGAGT 
GAGCTGATGC TGTTTGAGTC TTTTTTCCAG TCCTTCTCTC TGGCCGAAAG CAGTATAAAG 
ATACTTCTTT TCAGTGTGCT GGCCATACTG GCACTTACTT CGGCTTTGGC GGCAGCCTGT 
TTTGTAAAGG CCTTTGGGGA GGTCTTTCTG GCTATGCCCC GCAGTCAGGA AGCGGCTTCT 
GCCAAGGAAG TTTCAAAAAG TATGATTATA GGGCCGGCTA TACTGGCAGT TGCCTGTCTG 
GTACTGGGTC TTTTTACTGT TCCTATATTC GAAATGGCAG GTTACAGTTT TGACTTACCG 
GATATGTCAC TGGTTGGTCT GGTGCTGGTT ATATTCGGGG TTTTGGTCTT CGGTATGGTC 
AGGCTGTTTT CCCCCCGGAA AAGTCGCCGG AGTGAGACCT GGGCTTGCGG ATATATCCGC 
CCCACCCCCC GCTTTGAGTA TACCGCCGCC GGTTTTGCCG AACCTCTTTT CCAGATATTC 
CGGCTGATAT ACCGCACCCG CCACTACAAT GAACGCAGTT ACGAAGATAA CCAGCAGGCT 
ATTTTCAAGC AGGGCAAGTC CGCCATTCAC ACATTAAAGT TTTTTGATGA GTATATTTAC 
CTGCCAATTG CCGGTTTGTT CGGGCGTATT TCCCGTTACG TATCCCGCCT GCAGGACGTT 
GATTTGGGCA GCCATATCCT GTACAGCTTT ATGACTGTTT TGATGGTTAT ACTGGCGGCA 
AGGTGGCTGT GGTGA 

 

Protein sequence

MTAGLLLGGG GLLLAAALTG IVLNHGRKKV WQAVLWLIIT AAICLICGSL PVFFGGPLDI 
SLWGIAPGLD ITFHFDHLAS FFVIIISLIS LCVAIYSLGY NHHLSSNERA NLLSAFMSVF 
ILSMVGVVAS ANTFSLLFFW EIMALSSFLL MMNDYQGVFT QRAGVYYFVL TQLSTVFLML 
MTVVMYIQNG SFELSLDGAP SGIQSFVFIL AFLTFGIKAG IIPLHKWLPY AHSASPSNVS 
ALMSGVMLKV AVYGLVRFLT DILSPEIWWG VSILLLGMIS ALLGIIYAFK EHDLKMLLAF 
CSIENIGIIM MGIGLYVIFG CYGLDTMAML ALGAALFHSL NHAIFKSLLF MTAGSVVIAV 
GDRNIEKMGG LVKLMPYTSV IFLVGAVSIS ALPPFNGFMS ELMLFESFFQ SFSLAESSIK 
ILLFSVLAIL ALTSALAAAC FVKAFGEVFL AMPRSQEAAS AKEVSKSMII GPAILAVACL 
VLGLFTVPIF EMAGYSFDLP DMSLVGLVLV IFGVLVFGMV RLFSPRKSRR SETWACGYIR 
PTPRFEYTAA GFAEPLFQIF RLIYRTRHYN ERSYEDNQQA IFKQGKSAIH TLKFFDEYIY 
LPIAGLFGRI SRYVSRLQDV DLGSHILYSF MTVLMVILAA RWLW