Gene DhcVS_1440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhcVS_1440 
SymbolgatB 
ID8658365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides sp. VS 
KingdomBacteria 
Replicon accessionNC_013552 
Strand
Start bp1341891 
End bp1343381 
Gene Length1491 bp 
Protein Length496 aa 
Translation table11 
GC content49% 
IMG OID 
Productglutamyl-tRNA(Gln) amidotransferase, B subunit 
Protein accessionYP_003330867 
Protein GI270308809 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000724342 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAACTA CAATGACTCA ATATGAAACA GTAATCGGGC TGGAAGTACA TGTTCAGCTG 
AATACCAAAA GCAAAATGTT TTGCCGCTGC AGTACAGACT ATACCAGTGC CGAACCCAAT
ACCCATGTCT GCCCGGTATG TCTGGGTATG CCGGGGGTAC TGCCCACTAT AAATAAACAG
GCGGTGGAAT ACACCATTAT GTCCGGCTTG GCTTTAGGCT GTGATATAGC TTCCTTTACC
AAGTTTGACC GTAAAAATTA CAACTATCCT GACCTTATGA AAGGTTACCA GATTTCCCAG
TATGACCAGC CGCTTTGCGG CAAGGGATTT ATGGATATAA ATATAGACGG GGCTATCCGC
CGCATTGGCA TAACCCGCAT TCACCTTGAA GAAGACGTAG CCAAACTGCA CCATGAGAGT
GATATTAACG GCCAGCCTTA CAGCCTTTTA GATATAAACC GCTCCAGCAT ACCTTTGATG
GAGATAGTCA GTGAGCCGGA TATGCGCACC CCGGAAGAAG CCCGCCAGTA CCTTATGAAA
CTGCGGACTA TAATGCGCTA TCTGGGTGTT TCCACTGCCA ATATGGAAGA TGGCAGTTTC
CGCTGTGATG CCAATATTTC CATACGGCCT GAAGGCTCAG ATGCTCTGGG CGCTAAAGTG
GAAGTAAAAA ATATGAACAG CTTCAAGGCG GTTTTTTCCG CCTTGGAATA CGAAGAAATC
CGCCAGCGGA AAATGGCAGA TGAAGGCAAA AAGATAAGCC AGGAGACCCG CGGCTGGCAG
GACGACAAAT GTCAGACTGT CTCCCAGCGT TCCAAGGAAT TTGCCCATGA CTATCGCTAT
TTCCCCGAAC CGGATTTGCC CCCCCTGCAT ATCAGCTGTG ACTGGATAGA AGCCATCAGG
GCTAAGCTGC CCGAACTGCC CGAAGTCCGC AAAGAAAGGT TTATTCAGGG ATACTGGCTG
TCCGAATATG ATGCTTCGCT GCTGACTGCC AGCCGTGAAC TGGCAGACTA TTTTGAAGCG
GTTCTGTCCG AAGCTGATTT CCAGAATATC CCCCAGGACA AGGGCGTAAA GGAAGTGGCT
AACTGGGTGG TTGGGCCGGT AAGCTCCATA ATGAATACTG CCGGGGCGGA TATAAACGCT
TTTGCCCTCA AGGTCAGCCC GGCCAGTCTG TGCCATCTTT TGGTGCTGGT TTCAGCCGGC
AAAGTAAATG CCGCTACAGC CAAAGCTGTG CTTGAGGATA TGTATAGTAC CGGGCAGAAT
GCCGAGACTA TTATTGAAAA GAAGGGTCTC AGCCAGATTT CCGACAGTTC CGAGCTGGTA
GCCATTGCTA AAAAGGTGCT GGCGGATAAC CCCAAGGCGG TTGCCGAATA TAACGAAGGC
AAGACCCAGG TTATCGGCTT TTTAGTAGGC CAAATGATGA AACAAAGCAA GGGCAGAGCC
AACCCTAACA TAGCCATGGA GTTGCTTAAG AAAGCTCTGG AGGAAGGATA A
 
Protein sequence
MVTTMTQYET VIGLEVHVQL NTKSKMFCRC STDYTSAEPN THVCPVCLGM PGVLPTINKQ 
AVEYTIMSGL ALGCDIASFT KFDRKNYNYP DLMKGYQISQ YDQPLCGKGF MDINIDGAIR
RIGITRIHLE EDVAKLHHES DINGQPYSLL DINRSSIPLM EIVSEPDMRT PEEARQYLMK
LRTIMRYLGV STANMEDGSF RCDANISIRP EGSDALGAKV EVKNMNSFKA VFSALEYEEI
RQRKMADEGK KISQETRGWQ DDKCQTVSQR SKEFAHDYRY FPEPDLPPLH ISCDWIEAIR
AKLPELPEVR KERFIQGYWL SEYDASLLTA SRELADYFEA VLSEADFQNI PQDKGVKEVA
NWVVGPVSSI MNTAGADINA FALKVSPASL CHLLVLVSAG KVNAATAKAV LEDMYSTGQN
AETIIEKKGL SQISDSSELV AIAKKVLADN PKAVAEYNEG KTQVIGFLVG QMMKQSKGRA
NPNIAMELLK KALEEG