| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_1425 |
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| Symbol | rdhR |
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| ID | 8658350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. VS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013552 |
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| Strand | - |
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| Start bp | 1328611 |
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| End bp | 1329045 |
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| Gene Length | 435 bp |
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| Protein Length | 144 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | |
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| Product | transcriptional regulator, MarR family |
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| Protein accession | YP_003330852 |
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| Protein GI | 270308794 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00000183879 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAAGGC AAGCATTTAT TGAAGATATT TACAATAATA TGTGCCTTAT AAAGAAAATT
ATGTTTGCGG CCGGCCATGC CGGAGGAAAC GACCTGGTTC TTGGCCATAC CCAAATGATG
GTACTAAGGG CAGTAGAAAA AAATAAAGGC ACGGGCATTA AAGACCTGGC CAATTTGCTC
AGTATCAGCC CCAGTGCGGT TACCCAGATA GTAGACGGTC TGGTGGAAAA AGGGCTGCTT
ACGCGGGAGA TAGATTTAAA AGACCGGCGG GCTATCTCTC TCAGCATTAC GGCGGCGGCA
TCAGACAGGA TAGCTGAAAT AAAGAAACAA ACTGCAGTAA AAGTAATATC CGCCTTTGAG
GTGTTGAGTG ATGACGAACT GGCTACGTTT GCGTTGTTGA ATAAAAAACT GGCAGAAAAG
ATTACAGGAA ACTAG
|
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| Protein sequence | MTRQAFIEDI YNNMCLIKKI MFAAGHAGGN DLVLGHTQMM VLRAVEKNKG TGIKDLANLL
SISPSAVTQI VDGLVEKGLL TREIDLKDRR AISLSITAAA SDRIAEIKKQ TAVKVISAFE
VLSDDELATF ALLNKKLAEK ITGN
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