Gene DhcVS_1423 details

Gene Information

• Locus tag: DhcVS_1423
• Symbol: rdhI
• ID: 8658348
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. VS
• Kingdom: Bacteria
• Replicon accession: NC_013552
• Strand: -
• Start bp: 1324670
• End bp: 1326817
• Gene Length: 2148 bp
• Protein Length: 715 aa
• Translation table: 11
• GC content: 48%
• Product: radical SAM/B12 binding domain protein
• Protein accession: YP_003330850
• Protein GI: 270308792

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.623089
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAAACTT TACTGATTTT CCCGCCCCAG TGGATTCCTT ACCAAACATA TCTCAGCCTG 
CCTTCGCTTA CAGCTTACCT GAAGGAAAAT GGTATAGATA CCGTCCAGTA TGACTTCAAT 
CTTGAAGCTT ACAATGCTTT TTTCTCCGAA GAATATCTGC GCAGCCTGAA AACTGGTCTG 
AACGCTGAAT TCAAGCGTCT TGATTCTTCA CGCAGTCTGT CCCCGCTTGA TCAGCAATAC 
TACAATGACC TCTTTATTGC AGGTGCCTCT CTGGAGAAGG TGGCAGGCGG GATTTCAAAG 
GCAAAAGCTG TCTTCCATGA TAGCACCAGC TACTATGACC CCGATATACT CGCACAGGCC 
AGAGAGACTT TAAATCAGGC TATGGCCATA ATTTCTACTG CCCACTTCCC TACCCGCCTG 
GACTTGAGTT CCTTTGAAAT GGGCGCTTAC CGGCGGTCTT ACCGTGATAT AAAAGATGCC 
ACCGTGGATA ATGCACAGAA CCCCTATATT AAACTCTGCC GGGAAAAGCT GCTGCCTTTT 
ATAGCTGGGT GCCGGCCGGA TATTATCGGA ATCTCAATTG CAGGTGACAG TCAGCTGCTT 
CCGTCACTCA CTTTAGCCCG CCAGCTCAAA GCGGCAAACC CCAAGGTGCA TATAGTAATC 
GGTGGGTATA TTGTTACCCT GCTTGGAGAT GTGATTGCCC GCCATGAAGA GCTTTTTAAA 
CTTTTCTTTG ACAGTGCCGT GGTCAACGAG GGTGAACAGC CCCTGCTTGA GCTGGTTAAA 
TGCCTTGAAA GCGGGCGAAG CCTCTCCGAA GTTCCCAACC TTATTTACTT TGACGGTTGT 
ATAAGGGTAA ATCAAACCAG ACCTTCACTC AAAATAGATT CTCTTCCTAC CCCCTGTTTT 
GAGGGTCTGA ATCTGGGTGA TTACCTTTCG CCGGAGCCGG TTTTGCCCCT GCTTGCCTCC 
CGCGGGTGTT ACTGGGGCAA GTGTGCTTTC TGCTCCCATA ACGAGGCCTA TGGCTGGCGC 
TACCAGAAAA GAGACGCCGT TAAAATTGCA GAGGATATGC GGGTGCTCTC AGTAAAGCAT 
CAGATTGATA AATTTGCCTT TGCTGATGAA GGTTTAGCTC CCTCTCTGGC AAACAAGCTT 
TCAGAGGAAC TTATAAACAG GGGTATAAAG GCCAGTTGTT CGGTGAATGT GCGGCTGGAA 
CTCGGCTTTA CACCGGAACT GTGCTTTAAA ATGCGCAAGG CCGGTTTCAG GGTATTATTT 
TTAGGGCTTG AGTCCGGTTG TAATCGTATC CTTGAGCATA TGGAAAAAGG TACAACCAAA 
GAGATAGCCG CACAAGTCTG CCGCAATATT TACCGGGCAG ATATCTGGAA TCATCTGTAC 
GTATTTCTGG GTTTCCCGAC TGAGAGTGCG GCTGAGGCAG GGGAAACAAT TGACTTTCTG 
GCTGAAAACA GGGATATTAT CCACTCTTTC AACATAGATT TTTTCAGTTT GGGCAAGGGG 
TCTGCTGTGT CCAAACTGCC TGAAAAATAT GGGGTTACCG CTGTTATAGA AAATAAAAAA 
GCAGATGAGT TTAAGCTCTC ACGCAGTTAT CAGACGTCTT GCGGCCTCTC CAGTCAGGAA 
GCCTGTGAAA TGAGTATCCA TAGCTGGGCT GAACTTATAA ACCAGCACCC CAGCCGTGAT 
ATTTTTAAAA GGCTTTTAGT GGCTGACCTT TTGCCGTATG TATCCCGTTA CTCGCTTGTC 
ACAGACCTGC TGAGTGCCGC AGAAATATCT CCGAAAGCAG AAAAGCCTCA GGATTATCCG 
GTAAATGCTT CGGCAGTTCC CCTGTTAAGC AAACAGTTAA ACTCCGCGGT ACTTAATTTC 
AATCTGGCGA AAATAAGGCA GAATATCAGC CGCAAGCTTA CCCAGTCTGC CACTCCCGAA 
AAAACCACGG TGGTGTATGA GCCGGTTAGA AGCCGTCTCA TAACGCTTAC CCGTACGGAG 
CTGGCTATAT TGGGTCTATG TGACGGCAGG CGTGATTTGG AGCAGATTGT AGACGCGTTA 
TCTGCCGGGT ACAATGCCCC CAGGGATATC ATCGAAAAAG ACTGCCGTCA GTTTTTACGC 
CTGCTGCGGG AAATGCAGAT TATATCCTTT AAAAATAAAC CGGCATAG 

 

Protein sequence

MKTLLIFPPQ WIPYQTYLSL PSLTAYLKEN GIDTVQYDFN LEAYNAFFSE EYLRSLKTGL 
NAEFKRLDSS RSLSPLDQQY YNDLFIAGAS LEKVAGGISK AKAVFHDSTS YYDPDILAQA 
RETLNQAMAI ISTAHFPTRL DLSSFEMGAY RRSYRDIKDA TVDNAQNPYI KLCREKLLPF 
IAGCRPDIIG ISIAGDSQLL PSLTLARQLK AANPKVHIVI GGYIVTLLGD VIARHEELFK 
LFFDSAVVNE GEQPLLELVK CLESGRSLSE VPNLIYFDGC IRVNQTRPSL KIDSLPTPCF 
EGLNLGDYLS PEPVLPLLAS RGCYWGKCAF CSHNEAYGWR YQKRDAVKIA EDMRVLSVKH 
QIDKFAFADE GLAPSLANKL SEELINRGIK ASCSVNVRLE LGFTPELCFK MRKAGFRVLF 
LGLESGCNRI LEHMEKGTTK EIAAQVCRNI YRADIWNHLY VFLGFPTESA AEAGETIDFL 
AENRDIIHSF NIDFFSLGKG SAVSKLPEKY GVTAVIENKK ADEFKLSRSY QTSCGLSSQE 
ACEMSIHSWA ELINQHPSRD IFKRLLVADL LPYVSRYSLV TDLLSAAEIS PKAEKPQDYP 
VNASAVPLLS KQLNSAVLNF NLAKIRQNIS RKLTQSATPE KTTVVYEPVR SRLITLTRTE 
LAILGLCDGR RDLEQIVDAL SAGYNAPRDI IEKDCRQFLR LLREMQIISF KNKPA