| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_1405 |
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| Symbol | |
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| ID | 8658330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. VS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013552 |
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| Strand | + |
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| Start bp | 1302166 |
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| End bp | 1306305 |
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| Gene Length | 4140 bp |
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| Protein Length | 1379 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | |
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| Product | sensor histidine kinase/response regulator |
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| Protein accession | YP_003330832 |
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| Protein GI | 270308774 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAGATA CGCCGAAAAG AAATAAACTG CACCAGTCAA ATATTTTGTA TTCTACGCTG
GTAGAAAAAA GCAATGACGG GATTATTATT ATTCAGGATG AGCGGCTTAT TTATGCCAAC
CCCAAAATGA CCGTCCTAAC CGGTTTCTCA CTTGAAGAAA TAACAGGAAA ACCATTTGTA
GATTTCATCT CCCCCAAATA CAGACCGATG GTACTCGAGA GGTATCAAAG GCGGCTGGCA
GGAGAGAACG TAACCAACCA GTATGAGATA GAGATTGTAT CTAAAGATAA CCGCAAGATA
CCGGTTGAAA TCAACGCCAG CTATATAGAA TACGAAGACA AACCGGCCAA TATGGCTATA
TTACGGGACC TGACCGAATA TAAAATGTCC CAGCTGAAAC TGGCCGAAAA TGAAGCCCGA
TGCCATGAAC TATTCAAAAA CAGCTACGAT GCAATCCTGC TGACTATTCC CAACGGGCGT
ATTTTGGCAG CCAACCCGGC AGCCTGCAGT ATGTTTGGCA GAACTGAAAC TGAAATACGC
GAGATAGGGC GGGACGGGCT GATAGATGTA ACTGACCCGA GGTTACAACA GGCCCTGGAA
ATACGCGCCG CAACCGGAGA ATTTAAGGGC GAATTAACTT TCCTCCGCAG TGATGGTACG
ACCTTTCCCG GTGAAATTAC CTCCAAAATA TATCCTGTAG GCGAAGGCGA ACTCAGGACC
GCCATGATAA TACGTGATGT CAGCAAACGT AAAGAGGCTG AAGAAAAACT GAGGACAGCA
GAGGAACGTT ACAGGCTAAC GCTGGATAAC ATGCTGGAAG GGTGTCAGAT TATCGGACGG
GATTGGCGTT ATATATACCT CAATACTATG GCTGTCCGCC ATAGCCGGAA GCCTAAAGAA
GCGCTTATCG GCTGCACTAT GATGGAAGCA TACCCCGGTA TTGAAAATAC CGAATTGTTT
ATCCACCTTC GCCGCTGTAT GGAGAACAGA ATTGCAGCCC GCATAGAAAA CCGTTTTATT
TTCCCGGATA ACGCTGAAGG TTGGTTTGAA CTAAGCATTG AACCCGTTCC GGAGGGGATT
TTTATACTTT CACTGGATAT TACCAGACGC AGGGAAACTG AAAAACAGCT GCAAATCAGC
GAAGAGCGTT TTCACCGCAT ATTTGACCAG GTGCCTATCG GTATAGCTAT TACCGACCAA
TATTTTAAAT TTACCCAGGT AAATAAAACT ATATGCCGCA TGATGGGATA CTCCGAAAAG
GAACTCACCG CTATTACCTT TAAGGAAATA ACCCATCCCA AGTATCTGGC ATATGACCTT
AAGCAGTTAA AACTCTTATC CGCCGGTGTT ATAGATAATT TTGAACGCGA CAAACAGTAT
ATCCGCAAAG ATGGGAGTGT TTTCTGGGGG CATATTTCTG TCGGCGCCAT AAAAGATGAC
CAAGGCAAAA TCCTGTATTA CACCCCGTGT ATTTTGGATA TAACCAAACG CAAACAAACT
GAACAAGCCC TGCAGAAATA TAAGCTTATT GCTGATGACA GCCGGGACAT AATACTGTTT
TTGGATAAGA ATAGCGGGCA GATATTGGAA ACTAACGCCG CCGCCACTAA GGCATACGGA
TATACCCGCA GGCAGTTACT GAATAAAACC GTATATGAGA TCCGTCCGCC GGAAACACGG
GCGGCTATAC CCATGCAGCT GGCGCAGGCT GATTCTGAAG GTATACTCTT TGAATCGTAC
CACATGCGCA AGGACGGAAG CATTTTCCCT GTAGAAGTAA GCTCACGGGG AGCTACCATA
AACAATACCA GGGTAGTGGT AAGCGTGATA CGTGATATCA GCGAACGCAA GAAGGCTGAG
GAAAAATTTA AAACTATATT TAAACACCAG GAAACCATAC TGGCCACCGT GCCGGATATT
ATTGCCGAGA TGGATACAAA CAAAGTCTAC ACTTGGATAA ATGAATCCGG ACTGGAATTT
TTCGGGGACG ATGTAATAGG CAAAGAGGCA TCTCACTATT TTATAGGGAA ACAGGATACC
TACCAGAAAA TCAGACCCGT TTTCAGCGGC GGTGAAAATA CTGTTTACGT TGAAAGCTGG
CAACGCCGCA AAGACGGGGA GCCCCGCTTG CTGGGCTGGT GGGCACATTC GCTAAAGGAT
ATAACCGGCA AAACAGTGGG GGCGTTGTCA GTTGCCAGTG ATATCACCGA CCGCAAGAGG
ATGGAAGAAA ATCTGGTCAA ATCCGCCGCA GAGTGGAGTA CAACCTTTGA CTCTATAAAT
GACATGATAT GCATAGTAGA CGCCGGATAT ATGATTCTGC GGGTCAATAA TGCATTTGCC
AAGTCCCTTA AGCTGCCGCC GGAGGAAATT ATAGGCAAAC ACTGTTATGA GCTTATTCAC
TCAACCAAGC AGCCCCATTT TATGTGCCCG CATAAGAAAA CCCTTGAAAC CGGCCGTTCA
CAGGTAAGCG AATTCTTTGA AGAAAACCTT AATACCTGGG TTGAAGCCAC TACCTCACCC
GTGCTGGATG CGAATAACCG GGTAGTAGGG TCAGTTCACG TAATAAAGAA CATTAATGAA
AGAAAGAAAT CTGAAGAAGC TTTGAGAGCG GAGCGTGAGA CCTACATGTC CCTTTTCAAC
AGCGTCACGG ACGCAATTAT CGTGCACCGC CCGAAGTCAG ACAATACTCC GGATAAAATT
CTGGAAGTAA ATGATGCATG TACAGCCATG CTGGAATATA GCCGTGATGA GTTGCAAAAT
ATGACGGTGA GGGATTTTGT AAAGGGCATG GCTGGTGATG CTGCTCTATT CACCAGTGTT
ATTGAACAAA TTGAGAGAAA TAAGGAAGCC ACTTTTGAGC GTACATTTGT GACCAAAACC
GGACGGGAAA TACCGGTGGA AATCAGGCCA AGAATATTCC TTTTCGGGGG AAAACCTACT
GTCATTACCA TGGCCAGAGA TATCAGTGAC CTGAAAAAAA TAGAGGCAGA GCAGCAAAAA
CTGCGTGAGC GGGCAGATAT GGCTAATCGT CTGGCCGCGG TAGGGGAAAT GGCGGCGGGT
ATTGCCCACG AGATTAATAA CCCTTTAACC GGTGTGGTTG GTTTTGCAGA GCTGCTTTCA
AACAGACCTG ACTTGCCCGT TGATGTGCAG GACTCTTTAA AGGTTATAAA CAACGGCAGC
TTGAGAGTAG TTGAGATTGT AAAAAGACTG CTGACTTTTG CCCGTCAGAC AAAACCGATT
GTCAGCAAAG TCAGTATTAC CGATATTATT GATAACTCCC TGACACTGCG CAGTTATGTA
CTGGAAACAG CCGGCATAAC CATAATACGT GACTATGCCC CGGACCTGCC ATGGATAAAT
GTTGATCCCG CTCAGATACA GCAAGTTTTC CTTAATCTGA TATTAAATGC CGAACAATCC
ATGAAAAAGG CTCATGAAAA AGGCACTCTT TCCATAAAAA CTGAAAAAAC GGGCGAATAT
ATACGCATTT CATTTAAAGA TGACGGAACA GGTATAGCGG CGGATGTAAT GGATAAAATA
TTCCAGCCGT TTTTCACCAC CAAAGACCCG GGACAGGGAA CAGGATTGGG GTTAAGCCTG
TCACAAGGCA TTATTTTGGA GCACAACGGC AGAATATGGG CTGAAAATAA CCCCGAAGGG
GGTGCCACCT TTGTAATAGA ACTGCCCGTA AGCACCACTT GTGAAATTCC AACCCAACCT
TCAGAGAAAA GTGCTCCGGC ATATTCGGCA CCAAAAAGAT CAGCTTCAGC CCTGGTGATA
GATGATGAGC CTGCGGTTAG ATCCCTGTTG AAAATCATTT TAACCCAGGA TGGACACCAG
GTAGAGGAGT GCGAAAACCC GGAAAAAGCA CTGGACAAAC TACGCGAACA TACATATGAC
ATTATCTTTC TGGATATCCG CATGCCCGGC ATGAGCGGAA CCGAGCTCTA CGACAAGATT
ATCAGCAACT GGCCCGGATT AACCGGCCGT ATTGTATTTA TCACCGGCGA CACCTCTGAT
GCCAAAGTCA GGGAATACCT TGATAACCAC GATATCCCCT ATGTTACCAA ACCCTTCGAC
ATGTCCCTGC TTAAAACTGC CATGCACAGG GTATTAAGCA AGATAGATGC GGATAACTGA
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| Protein sequence | MKDTPKRNKL HQSNILYSTL VEKSNDGIII IQDERLIYAN PKMTVLTGFS LEEITGKPFV
DFISPKYRPM VLERYQRRLA GENVTNQYEI EIVSKDNRKI PVEINASYIE YEDKPANMAI
LRDLTEYKMS QLKLAENEAR CHELFKNSYD AILLTIPNGR ILAANPAACS MFGRTETEIR
EIGRDGLIDV TDPRLQQALE IRAATGEFKG ELTFLRSDGT TFPGEITSKI YPVGEGELRT
AMIIRDVSKR KEAEEKLRTA EERYRLTLDN MLEGCQIIGR DWRYIYLNTM AVRHSRKPKE
ALIGCTMMEA YPGIENTELF IHLRRCMENR IAARIENRFI FPDNAEGWFE LSIEPVPEGI
FILSLDITRR RETEKQLQIS EERFHRIFDQ VPIGIAITDQ YFKFTQVNKT ICRMMGYSEK
ELTAITFKEI THPKYLAYDL KQLKLLSAGV IDNFERDKQY IRKDGSVFWG HISVGAIKDD
QGKILYYTPC ILDITKRKQT EQALQKYKLI ADDSRDIILF LDKNSGQILE TNAAATKAYG
YTRRQLLNKT VYEIRPPETR AAIPMQLAQA DSEGILFESY HMRKDGSIFP VEVSSRGATI
NNTRVVVSVI RDISERKKAE EKFKTIFKHQ ETILATVPDI IAEMDTNKVY TWINESGLEF
FGDDVIGKEA SHYFIGKQDT YQKIRPVFSG GENTVYVESW QRRKDGEPRL LGWWAHSLKD
ITGKTVGALS VASDITDRKR MEENLVKSAA EWSTTFDSIN DMICIVDAGY MILRVNNAFA
KSLKLPPEEI IGKHCYELIH STKQPHFMCP HKKTLETGRS QVSEFFEENL NTWVEATTSP
VLDANNRVVG SVHVIKNINE RKKSEEALRA ERETYMSLFN SVTDAIIVHR PKSDNTPDKI
LEVNDACTAM LEYSRDELQN MTVRDFVKGM AGDAALFTSV IEQIERNKEA TFERTFVTKT
GREIPVEIRP RIFLFGGKPT VITMARDISD LKKIEAEQQK LRERADMANR LAAVGEMAAG
IAHEINNPLT GVVGFAELLS NRPDLPVDVQ DSLKVINNGS LRVVEIVKRL LTFARQTKPI
VSKVSITDII DNSLTLRSYV LETAGITIIR DYAPDLPWIN VDPAQIQQVF LNLILNAEQS
MKKAHEKGTL SIKTEKTGEY IRISFKDDGT GIAADVMDKI FQPFFTTKDP GQGTGLGLSL
SQGIILEHNG RIWAENNPEG GATFVIELPV STTCEIPTQP SEKSAPAYSA PKRSASALVI
DDEPAVRSLL KIILTQDGHQ VEECENPEKA LDKLREHTYD IIFLDIRMPG MSGTELYDKI
ISNWPGLTGR IVFITGDTSD AKVREYLDNH DIPYVTKPFD MSLLKTAMHR VLSKIDADN
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