| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_1402 |
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| Symbol | rdhA |
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| ID | 8658327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. VS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013552 |
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| Strand | - |
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| Start bp | 1298295 |
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| End bp | 1299794 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | |
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| Product | reductive dehalogenase |
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| Protein accession | YP_003330829 |
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| Protein GI | 270308771 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00204674 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCAATT TTCATTCGAT AGTAAGCCGC CGTGATTTCG TAAAGGCTTT GGGTTTAACT
GGAGCCGGCA TTGGTACTGT GGCTGCCGCT GCACCGGTAT TTCAGGATCT GGATGATGTC
ACAGCTTCCC CAAATGCGGA ATGGAAACGC CCTTGGTGGG TAAAACAACG TGAACTGGAT
GACCCCACCA CCGAAATAGA CTGGGATATG ATGTATCGGT CTGATGGGCG TATGGTAGGT
CAGGTACGTT CAGTTCAGAT AAAATATCTG GGCGAAGAGG AAGTAAACAG ACGCAATGCA
GTGGGTACAA AATTTACTTC CGACGGCTTG AAAAACAATA CCCCCGGTTT AAGACTGCGT
GACCAGGCTT TGGCCGCAGG TGTGATGAGT ATGCTGCCTA TGGCAATGGG GCAAATACCC
AGCATGAGCT TTATGGGACC GTCAACCGCT ACCCCCGAAG CCCGCGGTGT GGCAAAATAC
CAGGGAACAC CAGCCGAAAA TTCCCGCATG CTTCGGAGCG CCTTAATCTT CTACGGGGCT
GCCCAGGTAG GTTATGGCGA GGTAACCCAG CGTTATAAGG ACAAGCTTTT CCGTACCTTT
GACAAGGGTA ATGCCGCCAC TGCTTACCAA GGTGCCTGGC CTCCCCCGCT TACCCAGTGC
AAACAGTACT TTTTTGAAGA TGTACCGGTT GGGTACGAGA CTACTGAAAA GATGGTCTTC
CCCTCCAATG TACCTTTGTA CGAGTTTACT TTCACTGTTG CCATGTCAAA GGAAATGTTC
CGTTGTTCAC CCAGCTCCGC ACTTCAGAAT GCGGCTAACC TCAGCCGGTA TACTACCATG
TCGCAGATTC AGCCCAAGAT TCAGGCTTTT ATTAAATCTT TGGGTTATCA GTGTTATGGT
TATACCCTGC CCATGAATGG TGCTGTACCT ACTATTGCCA GTGCCATACT GACCGGTCTG
GGTGAAGGTG CCCGCAATGT AGGTGCGTTT AACAATCCCG AATTCGGCTC AATAACCGGC
CTTTTCCACC TGATTACCGA TTTGCCTCTT GAGCCTACCC CACCCATTGA TGCCGGTATG
TGGCGTTTCT GCCATACCTG CACCAAGTGT GCAGACAGCT GCCCCTGGAA TGCTATTCCC
ACAGATCACG AGCCTACTTG GGAAATTCCC AAGCTGTATG GTCAGGAAGA TACCACTCAC
GTACCCGGCA AGAAACAGTT TTGGACAAAC AGCGTTGACT GCTGGTTGGG CAGAGTCCAG
CTGGGTACAT GCGGTGCCTG TATGGGTACT TGTACGTTTA ATACCGGCAA GAATGCTATC
CATGATTATG TCAAAGCCAC TTTGTCCACC ACTCCTGTTT TCAACAGCTT CCTGTGGCAG
GCAGACAAGG CCTTTGGTTA TGGTCTCAGA GAAGGTGAAG ACCTTGAAAA CTGGTGGGAT
ATGCCCCAGC CTATCGGTGG GTTTGACAGC ACCTGCGGTA TTCAGGGCGG AAGTTACTAG
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| Protein sequence | MPNFHSIVSR RDFVKALGLT GAGIGTVAAA APVFQDLDDV TASPNAEWKR PWWVKQRELD
DPTTEIDWDM MYRSDGRMVG QVRSVQIKYL GEEEVNRRNA VGTKFTSDGL KNNTPGLRLR
DQALAAGVMS MLPMAMGQIP SMSFMGPSTA TPEARGVAKY QGTPAENSRM LRSALIFYGA
AQVGYGEVTQ RYKDKLFRTF DKGNAATAYQ GAWPPPLTQC KQYFFEDVPV GYETTEKMVF
PSNVPLYEFT FTVAMSKEMF RCSPSSALQN AANLSRYTTM SQIQPKIQAF IKSLGYQCYG
YTLPMNGAVP TIASAILTGL GEGARNVGAF NNPEFGSITG LFHLITDLPL EPTPPIDAGM
WRFCHTCTKC ADSCPWNAIP TDHEPTWEIP KLYGQEDTTH VPGKKQFWTN SVDCWLGRVQ
LGTCGACMGT CTFNTGKNAI HDYVKATLST TPVFNSFLWQ ADKAFGYGLR EGEDLENWWD
MPQPIGGFDS TCGIQGGSY
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