| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_1396 |
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| Symbol | rdhC |
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| ID | 8658321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. VS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013552 |
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| Strand | + |
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| Start bp | 1291283 |
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| End bp | 1294561 |
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| Gene Length | 3279 bp |
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| Protein Length | 1092 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | |
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| Product | sensor histidine kinase/response regulator |
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| Protein accession | YP_003330823 |
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| Protein GI | 270308765 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAAAA TCGATTTATT TTACAATCTG GCCCTTCTGA TATTTGTAGT TGTCATAATA
GACCTGATAA TGCGTCATGG CGGCTACTTC ACCCGTAACA GCAAAATTAT TCTGGGTATG
GTTATCGGCG GAGCTACCAT ACTGGGTATG ATGAATGCCG TAAGCGTAGC ACCCGGGGTT
TTCTTTGACG GCCGTTCCGT ACTTATCAGC GCCGGTGCGT TTATAGGCGG CCCGGTCATA
GCCCTGATAT CCTCTGTCAT CGCCATTATT TTCCGAATCT CATTGGGGGG TGACGGCGTA
CTTGTCGGTT CAAGTGTAAT TGTCTGGGCG GCTCTGGCAG GGCTTGCTTA CTACTATCTG
AGGCAGCGCT ATTCCAAGAT TACAAACCCT TTGCTGCTGC TTGCTTTCAG TCTGATTGTA
CATGCCGGAA TGCTGGGTTT GATGCTGGCC CTGCCCGGAG GTATTTCCTC CACTGTTATC
AGCGAAATTG CTTTTCCGGT ACTCACTATA TTCCCCATTG CCGGTTTGAT TGTCTGTCTG
CTGTTTTTAG ACCAGGAATC TTATTACTCA ACCATATCTC ATCTGTCACT AAGCGAGCAT
AAACTGAAAA CCGCTCTTGA GGCTATAAAG GAAAGCAGCG AAAAACTACG TCTGCATACC
CAAAACTCTC CGCTGGCTAC TATAGAATGG GATGCTGATT TTATAGTCAC CCGCTGGGAA
GGTGCCGCAC CCCATATATT CGGCTGGGGC GCTTCCGAAA CCATAGGCAA ATCCGTCTAC
GACCTGAACA TAGTATACGA ACCGGATGCA CCTATCGTCG AGCAGACTAT TAAAACTCTT
AAAGAGGGCA TCAGCAGCCA GGTTGTAACT CTTAACCGTA ATTACACAAA GGACGGGCGG
GTTATTCACT GCACATGGTA CAACTCGGCC CTTTATGACA GTAATAACAA GATGATATCC
ATGATGTCTC AAGTGGAAGA CTCCACCGAA CACGAACGGA TTGAAACAGC TTTGGCTGAA
AATGAAAAGC ACTACCGCGA ACTATACGAA CAATCCCCCG CCGGATACCA ATCACTTGAC
CAGAACGGGG TTTTCATAGA AGTAAACCGC CTTTGGCTGG ATACCTTAGG CTACCAAAAA
GAAGAGGTAA TAGGACACTG GTTTGGTGAA TTTGTAGCAT CCGAGGATTT AGATAAATTT
AAAAAGAATT TCCCGCGTTT TGTCAAAGCC GGCCATACCC ATGTGGATTT CAAGATGAAA
CGGAAGGACG GGCAGATAAT AATTGTTGCC TTTGAAGGAC GGATTGCCTA CACACCCAAA
GGTGAGTTTA AACAAACCCA CTGCATTATT CAGGATATAA CCGAACGTTA TAAAGCCGAA
GAGGCAACCC GGGAACACAA AGAAAGATAT GAGGCATTGT TTAATTCCAA TAATGACGCC
ATTCTTGTCC ATCAGCCGCA GGGCGAATTG ACACCGGGGA CTTTTATAGA AGCAAATGAT
GCCGCCATTA CGCTTTTAGG TTATAACCGG GAGGAACTCT TAAAACTTTC CCCGTTTGAT
ATTACTAAAA ACGATAACAT GAGTTCGGAA CCGGTTAAAA GAACCATGGA ATCTTTGAGG
CAAACCGGGA AAGTGCAAAA TGAGCGCATA TTCATTCACA AAGACAGACA CGAAATCCCG
GTGGAAATAA ATGCCAGATT ATTTAAATAC AAAGGTATTG ATACCGTAAT TACCATTGTC
CATGATATAA CTACCCGAAA ACAGGCAGAG GCAGCTTTAA CTCACGCAGC CGAAGAATGG
CGCACTACCT TTGATTCCAT TAAAGACATG ATAGCTATTG TTGACCCGAA ACATACAATC
CTCAGGGTAA ATCTGGCTTT CGCCAATGCT CTCGGGTTTA AGCCCAATGA CCTGGTAGGC
AAACATTGTT ACGAGGTTAT CCACGGGATG AATCAGCCCC ATCCGATGTG CCCCCATGCC
CGTACGCTGC AATCCAAGCA CGTGGAATCC AGTGAGTATT ATGATAAAAA ACTGAAGCTC
TGGGTGGAAG CATCTTCGTC ACCTATATTT GATAACAAGG GCGATTTAAC TGGCTCGGTT
CATGTCATTA AGGATATATC CAAACGCAAA CAGGAAGAAC TGCAACAACA ACAGCTTCGC
AACAAAGCGG AAATGTCCAG CCGTTTGGCT GCGGTTGGCG AAATGGCAGC CGGTATTGCC
CACGAGATAA ATAACCCGCT TACCGGAGTA ATAGGTTTTT CCGAACTTCT GCTGGAAAGG
AAAGATCTAC CCGACGATGT CAAAGACAAC CTGCAAATCA TAAATGAAGG AAGCCAAAGA
GCCCGGGAAA TTATCAAACG GATGCTTACC TTTGCCCGGC AATCTACCCC CCAAATGAAC
AGGGTGGATA TAACCAGTCT GATAGACCAC ACTCTGGAAC TGCGTAATTA CGTACTGGCT
ACAGCCAATA TTAAGGTTAT CAAAGATTAT GATGCTAATC TCCCCTGGGT GATAGCAGAC
CCGGGTCAAC TTCAGCAGGT CTTTTTAAAT CTTATTGTAA ATGCGGAACA CGCTATGAAA
AAAGCCCATG ACAAAGGGAT ACTTACTATT CAAACAAAAA GCCTCGGCGA TTCCATACGC
ATATCAGTTA CAGATGATGG GCCGGGTATG CCTGATGAAG TTTTGAAAAA ACTCTTTCAG
CCGTTTTTTA CCACTAAAGA ACCGGGGGAA GGCACTGGGT TGGGGCTGAG CCTTTCGCTG
GGCATTATTC AGGAACATAA CGGCACTATA AGGGCAGAGA GCAAAGCCGG TAAAGGCACT
ACGTTTATTG TTGAGCTGCC TGCAGCCGCT GATGCTTACG CAACCGGGGA AATACCGCCT
GCGGCTGAAC CTCAAAAAAC CATAACTAAA GCCAATATTC TGGTGGTAGA TGACGAACAC
GCCATAAGGC TGCTTATAAG AACTATTCTC AGCCAAAACG GCCATACAGT TGAAGAGTGC
GATGATCCCC GCAAAGCACT GGATAAGATT ATATCCGCCG ACTATAACGT AATCCTGCTG
GATATCCGTA TGCCCGGTAT GAGCGGCATT GAACTCTTCA ACAATATTCT GGTGAAAAAA
CCGGTCCTGT CTCAATCTGT AATATTTATT ACCGGGGACA CCTCTGACGA AGCCACCAAA
ACATATCTGG AAGCTCATCA GACTCCTTAT ATCAGCAAAC CTTTTAGCCG CAAGACACTG
GAAACAGCAG TAGGTGAGAT CTTGGGGAAA AAACCCTAA
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| Protein sequence | MIKIDLFYNL ALLIFVVVII DLIMRHGGYF TRNSKIILGM VIGGATILGM MNAVSVAPGV
FFDGRSVLIS AGAFIGGPVI ALISSVIAII FRISLGGDGV LVGSSVIVWA ALAGLAYYYL
RQRYSKITNP LLLLAFSLIV HAGMLGLMLA LPGGISSTVI SEIAFPVLTI FPIAGLIVCL
LFLDQESYYS TISHLSLSEH KLKTALEAIK ESSEKLRLHT QNSPLATIEW DADFIVTRWE
GAAPHIFGWG ASETIGKSVY DLNIVYEPDA PIVEQTIKTL KEGISSQVVT LNRNYTKDGR
VIHCTWYNSA LYDSNNKMIS MMSQVEDSTE HERIETALAE NEKHYRELYE QSPAGYQSLD
QNGVFIEVNR LWLDTLGYQK EEVIGHWFGE FVASEDLDKF KKNFPRFVKA GHTHVDFKMK
RKDGQIIIVA FEGRIAYTPK GEFKQTHCII QDITERYKAE EATREHKERY EALFNSNNDA
ILVHQPQGEL TPGTFIEAND AAITLLGYNR EELLKLSPFD ITKNDNMSSE PVKRTMESLR
QTGKVQNERI FIHKDRHEIP VEINARLFKY KGIDTVITIV HDITTRKQAE AALTHAAEEW
RTTFDSIKDM IAIVDPKHTI LRVNLAFANA LGFKPNDLVG KHCYEVIHGM NQPHPMCPHA
RTLQSKHVES SEYYDKKLKL WVEASSSPIF DNKGDLTGSV HVIKDISKRK QEELQQQQLR
NKAEMSSRLA AVGEMAAGIA HEINNPLTGV IGFSELLLER KDLPDDVKDN LQIINEGSQR
AREIIKRMLT FARQSTPQMN RVDITSLIDH TLELRNYVLA TANIKVIKDY DANLPWVIAD
PGQLQQVFLN LIVNAEHAMK KAHDKGILTI QTKSLGDSIR ISVTDDGPGM PDEVLKKLFQ
PFFTTKEPGE GTGLGLSLSL GIIQEHNGTI RAESKAGKGT TFIVELPAAA DAYATGEIPP
AAEPQKTITK ANILVVDDEH AIRLLIRTIL SQNGHTVEEC DDPRKALDKI ISADYNVILL
DIRMPGMSGI ELFNNILVKK PVLSQSVIFI TGDTSDEATK TYLEAHQTPY ISKPFSRKTL
ETAVGEILGK KP
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