Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_139 |
Symbol | |
ID | 8657093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | - |
Start bp | 142092 |
End bp | 142664 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | |
Product | rhomboid |
Protein accession | YP_003329640 |
Protein GI | 270307582 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTGACA GCTTGGATAC AATCCAGATA GATGCTTTGC CGGTGGGCAT TGTAGTCATA GATACTTCAT CTAGAAAGAT TGTAAATATA AACAGGGTTG CCCAGAAACT TATCGGGGCA GGGGCATCCG AGATTATCGG CCATTCCTGC CACAAGTTCA TTTGCCCGGC GGCAGAGGGT AATTGCCCGA TACTGGATAT GGGACAATCA GTAGACAATG CCGAAAGGCA GCTGCTGACT AGCAGTGGCA AGCTGATTAC CATCTTAAAA ACTGCAAGCA GGGTTACCAT AAATGGCAGG GAGTTTCTGT ATGAAGTCCT GCAGGATGTG ACTGATCCGG TTAATCTCCG TAAACAGCTT CAGATACAGG TGGCCGAGCG TACCAAAGAG CTGGCCGAAA TAAACAGCAA ACTGGTTCAG GAAATAAAAA ACCATGAGAA AACGGAACGG AAATTAAACG AACTGTTTAC CCGTTATTCC ATGTTTTTTA ATAATTGCAA TGACGGGTTA ACTTTGATTG ATTTTTCGGG TGAAACACCG CCCGGTAAAT ATATTGAAGT AAACAAGGCT TTTTGCCAGA TGGTCAATTA TTCACGGGAA GAGCTCCTTC AGCTGACCCC GCTTGACCTT ACCGCTTCTG ATATGAAAGA TTATGCGCTG GAAAATACCA AACTGGTTAT TGAGTCAGAA TATGCGGTAC TCCGTTTCCC GAATGTATAT ATTACCAAAG ATGGCAGACG GCTGGATTGC GAAATAAATG CCAGCTTTAT TTATTTGAGC GGCAGGGAAG TAGCAGTGGT GGTCTATCGT GATATTTCGG AAACCAAGCG GCTTGAACAG AGCCTTCGGG AAGCCTATGA GCGGGAACTG CAGGCCCATG CGGAGGTTGA AGACCAGCTG AATCAGCGTA ATTACTTTAT GCGGGCACTG GTGCATGAGC TCAAAACACC CCTTACTCCC CTGCTTGCCT CCAGTGAATA CCTGGTATCC GAGCTTTCAG GCAGTGCTCT GCTGGGTTAT GCCCGAAACA TGCAGAATGG GGCTATTAAT CTGAATAACA AGATTGATGA CCTTATGAAC TTGGCCAAGG GGGAAATAGG CCAGCTGCAA ACAGACCCTG AGTATGCCAG TATCAGAAAA GTTATCGGGG ATTGTGTAGA TTACCTTCAG CCGCAGGCCC AGAAAATGCA AAAACGGATA GTGCTGAATT TTGGCAGCGA TATTCCGTTA ACGTTATTTG ATAAAAAAAT GATTCATCAG GTGGTGCTTA ATCTGCTCAG CAACTCACTC AAGTTTTCCC GTACCGGCAG TGAAATTTGT ATTGAGGCCG TGAAATCAGG GGATAATATA AAAATATCGG TCAGAGACCA GGGTACAGGT ATACCCAAGA ATAAGCAGCA GGGAATTTTT ACTCCTTATT ATCGTATCAA GACCAAGCGG GACAGGTACG GAGGGTTGGG TTTGGGGCTG GCTCTTTCCA AGATGATTGT TGAACTGCAC CGGGGCGAAA TATGGTTTAC CAGTGAATAC GGCCACGGCA GTACCTTTTA CTTTACACTG CCGATAAGGA GCGAATGGGA TGAAGACACT GATAATAGAG GATGA
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Protein sequence | MRYTNYRNQP DIILLVIITC VIVFFGVNFA PQIGPYLALQ PATAISYPWT IITSLFVHAD LWHLFANMIT LYFFGNALLQ MINQRSWLII FFGGGLAGSL LFILLNAGSF GYVIGASGAV FALGGTLAVL RPNSKVMVFP LPVPIPLWIA VIGSFIILSF LPSVAWQGHL GGLLVGAACG YLIKQGKFRF
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