Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_1338 |
Symbol | rdhI |
ID | 8658263 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | + |
Start bp | 1238184 |
End bp | 1239668 |
Gene Length | 1485 bp |
Protein Length | 494 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | radical SAM/B12 binding domain protein |
Protein accession | YP_003330765 |
Protein GI | 270308707 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATAC TGTTAGTAAA CCCGGGTACC GAGTACAAGC CCCGTTTCCG TACCTACGCC GTATTCCCTA ATGGACTGTT GTACATGGCA TCCGTACTGG AAGGGGCGGG GCACGAGGTA AAGGTATTTG ATAATGTAGT CTCGGAGCTG ACCCCGCCGG ATTATGCCCG TGACTTTGCG CCTGATGTAA TAGGCTTTTC GGTCTTAACC GGACCCTGCA TCGGTAATGC CCTTATCCAG TCAAAGGAAT TCAAGGCTCT GCTGCCTGGG GTCAAAGTAG TCTGGGGAAA TGTCCACGCC ACCTGCACTA CCGAACAGAC GCTGAAGGAA GAAGCCATAG ATTTTGTGGT AAGGGGTGAT GGTGAATATA CCTTGCTTGA GCTGGTAAAC CGGCTTGAAA AGGGGGATGG GGATTATGCG GGGATACTTG GGCTTGCATG GAAGGATAAA GAGGGCCGGA TAACAATTAA CCAGCCCAGA CCCTTTATCC ATAACCTTGA CGAGCTTCCT GACCCAGCCT GGCACCTTAT AGACGTACCC AAATACTGGG ACATCACCCT GAACACCAGC CGCGGCTGTC CGTTCAAGTG CAGTTTCTGC TACAACATCC CCTTTCATCA GGGACATCGG GCGGACCTTT CGGTGGAGCG GATAGTCTCC CAGATAGAGC ATCTTCAGAA GAACTACAAG GTCAAATTTA TCCGCTTCTT TGAAGACAAT TTCACCTTCA ACCGCAGGCG GATGAGGGAA TTCTGCCGGA CTATTATAGA GCGGCGGATA AAGATAAAGT GGGATACCGA AAGCCGGGCG GATATGTCAG AAGAAGACGT GGCCCTGATG GCCAAGGCCG GCTGTACCTC GGTGGGTATA GGGGTGGAGA CAGGCTCAAA ACGGATGCTT GAGTACCTTA ACAAGGGGAT AGACCTGGAC GAAATGGGGC ATACCTTCTG GCGGTTTGTC AGGCACGGCA TAATGCCCCG GCTTTATATT ATGCTGGCAG TGCCAAGTGA AACCCCGGCA GACTTCAAAG AGACCCAGGA TATGCTGCGG AAGATGGAAG ACCCGCCCTT TATGTACATG CGGTTTGTGC CCTATCCCGG CACACCCCTG TATGAAGAGC TGGTAGATAA CAAGCGGATA AAGCCGCCTG AAAGCCTTGA GGAGTGGGCC AAGTTTTCGG TTTACTTTGC CACCAGGGGC AACCTTTCGG AGCTTTCTGA TGAGCAGATA ACCCAGGCGC TCAGCCACTG GGCACATACA TATGCCAGCC GCCGGGTGAT GTTTACCCTA AGGCACAACC CGCGTTATCT GCTGGGGGCG GTAAAGAACC CATCGGAGTT TTTCAAGGCG CTGGGCAGTC TTATTAAGAA CTCCCTGCCG GTAGCCTTTA ATAAGAACAC CAATATCAAA CCGCTGGTGC TGGAAGCTGT GCCAAACAAG ATGTCCGGCA AACAGGAACC CAGACTTATC AGCAACTACG AGTGA
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Protein sequence | MKILLVNPGT EYKPRFRTYA VFPNGLLYMA SVLEGAGHEV KVFDNVVSEL TPPDYARDFA PDVIGFSVLT GPCIGNALIQ SKEFKALLPG VKVVWGNVHA TCTTEQTLKE EAIDFVVRGD GEYTLLELVN RLEKGDGDYA GILGLAWKDK EGRITINQPR PFIHNLDELP DPAWHLIDVP KYWDITLNTS RGCPFKCSFC YNIPFHQGHR ADLSVERIVS QIEHLQKNYK VKFIRFFEDN FTFNRRRMRE FCRTIIERRI KIKWDTESRA DMSEEDVALM AKAGCTSVGI GVETGSKRML EYLNKGIDLD EMGHTFWRFV RHGIMPRLYI MLAVPSETPA DFKETQDMLR KMEDPPFMYM RFVPYPGTPL YEELVDNKRI KPPESLEEWA KFSVYFATRG NLSELSDEQI TQALSHWAHT YASRRVMFTL RHNPRYLLGA VKNPSEFFKA LGSLIKNSLP VAFNKNTNIK PLVLEAVPNK MSGKQEPRLI SNYE
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