Gene DhcVS_1338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhcVS_1338 
SymbolrdhI 
ID8658263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides sp. VS 
KingdomBacteria 
Replicon accessionNC_013552 
Strand
Start bp1238184 
End bp1239668 
Gene Length1485 bp 
Protein Length494 aa 
Translation table11 
GC content52% 
IMG OID 
Productradical SAM/B12 binding domain protein 
Protein accessionYP_003330765 
Protein GI270308707 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATAC TGTTAGTAAA CCCGGGTACC GAGTACAAGC CCCGTTTCCG TACCTACGCC 
GTATTCCCTA ATGGACTGTT GTACATGGCA TCCGTACTGG AAGGGGCGGG GCACGAGGTA
AAGGTATTTG ATAATGTAGT CTCGGAGCTG ACCCCGCCGG ATTATGCCCG TGACTTTGCG
CCTGATGTAA TAGGCTTTTC GGTCTTAACC GGACCCTGCA TCGGTAATGC CCTTATCCAG
TCAAAGGAAT TCAAGGCTCT GCTGCCTGGG GTCAAAGTAG TCTGGGGAAA TGTCCACGCC
ACCTGCACTA CCGAACAGAC GCTGAAGGAA GAAGCCATAG ATTTTGTGGT AAGGGGTGAT
GGTGAATATA CCTTGCTTGA GCTGGTAAAC CGGCTTGAAA AGGGGGATGG GGATTATGCG
GGGATACTTG GGCTTGCATG GAAGGATAAA GAGGGCCGGA TAACAATTAA CCAGCCCAGA
CCCTTTATCC ATAACCTTGA CGAGCTTCCT GACCCAGCCT GGCACCTTAT AGACGTACCC
AAATACTGGG ACATCACCCT GAACACCAGC CGCGGCTGTC CGTTCAAGTG CAGTTTCTGC
TACAACATCC CCTTTCATCA GGGACATCGG GCGGACCTTT CGGTGGAGCG GATAGTCTCC
CAGATAGAGC ATCTTCAGAA GAACTACAAG GTCAAATTTA TCCGCTTCTT TGAAGACAAT
TTCACCTTCA ACCGCAGGCG GATGAGGGAA TTCTGCCGGA CTATTATAGA GCGGCGGATA
AAGATAAAGT GGGATACCGA AAGCCGGGCG GATATGTCAG AAGAAGACGT GGCCCTGATG
GCCAAGGCCG GCTGTACCTC GGTGGGTATA GGGGTGGAGA CAGGCTCAAA ACGGATGCTT
GAGTACCTTA ACAAGGGGAT AGACCTGGAC GAAATGGGGC ATACCTTCTG GCGGTTTGTC
AGGCACGGCA TAATGCCCCG GCTTTATATT ATGCTGGCAG TGCCAAGTGA AACCCCGGCA
GACTTCAAAG AGACCCAGGA TATGCTGCGG AAGATGGAAG ACCCGCCCTT TATGTACATG
CGGTTTGTGC CCTATCCCGG CACACCCCTG TATGAAGAGC TGGTAGATAA CAAGCGGATA
AAGCCGCCTG AAAGCCTTGA GGAGTGGGCC AAGTTTTCGG TTTACTTTGC CACCAGGGGC
AACCTTTCGG AGCTTTCTGA TGAGCAGATA ACCCAGGCGC TCAGCCACTG GGCACATACA
TATGCCAGCC GCCGGGTGAT GTTTACCCTA AGGCACAACC CGCGTTATCT GCTGGGGGCG
GTAAAGAACC CATCGGAGTT TTTCAAGGCG CTGGGCAGTC TTATTAAGAA CTCCCTGCCG
GTAGCCTTTA ATAAGAACAC CAATATCAAA CCGCTGGTGC TGGAAGCTGT GCCAAACAAG
ATGTCCGGCA AACAGGAACC CAGACTTATC AGCAACTACG AGTGA
 
Protein sequence
MKILLVNPGT EYKPRFRTYA VFPNGLLYMA SVLEGAGHEV KVFDNVVSEL TPPDYARDFA 
PDVIGFSVLT GPCIGNALIQ SKEFKALLPG VKVVWGNVHA TCTTEQTLKE EAIDFVVRGD
GEYTLLELVN RLEKGDGDYA GILGLAWKDK EGRITINQPR PFIHNLDELP DPAWHLIDVP
KYWDITLNTS RGCPFKCSFC YNIPFHQGHR ADLSVERIVS QIEHLQKNYK VKFIRFFEDN
FTFNRRRMRE FCRTIIERRI KIKWDTESRA DMSEEDVALM AKAGCTSVGI GVETGSKRML
EYLNKGIDLD EMGHTFWRFV RHGIMPRLYI MLAVPSETPA DFKETQDMLR KMEDPPFMYM
RFVPYPGTPL YEELVDNKRI KPPESLEEWA KFSVYFATRG NLSELSDEQI TQALSHWAHT
YASRRVMFTL RHNPRYLLGA VKNPSEFFKA LGSLIKNSLP VAFNKNTNIK PLVLEAVPNK
MSGKQEPRLI SNYE